Click here to switch to the map view.

The map label for this gene is 189184624

Identifier: 189184624

GI number: 189184624

Start: 1738978

End: 1739322

Strand: Direct

Name: 189184624

Synonym: OTT_1717

Alternate gene names: NA

Gene position: 1738978-1739322 (Clockwise)

Preceding gene: 189184623

Following gene: 189184625

Centisome position: 86.56

GC content: 35.36

Gene sequence:

>345_bases
ATGCGTGATTCAATCATGTCTATGACTGGCACTATCGTGGTTACAAACAATAATGTACACTTTTATGACTCCTTAGCTCA
GGACGAAAAAAGTTGGATTAGTCATTTAAAAGGCGGAGAATCAGCCTCGATTTACAGCTGTGATAGTGTCAGTTGCTTGC
ATCCAAGTCGACAACGAAATATCACAATATCTCCAGAGCAGTCTTATGGAGGTAGAGCTAAGCAAAAATTGACTGATCTA
AAAATTAAGTTTGATAATAATTATGAATTCACTAACTCTGAAATAGGCTTTTTATCTTCAATTGGAGATATATTTCCGAT
TTATGATTATATAGCACGAACGTAG

Upstream 100 bases:

>100_bases
CAAGCTCTGCGACAAGCACAAAATAAGGATTCAGAGTTAATGCTAGAATGATTATAACATCTTCACTAAAGCAGCAGCAA
AGGTTGGAATACCATCAAAT

Downstream 100 bases:

>100_bases
GAAATGGGTACATAATATGCTAATATGAAAAGAGTATAAAAAATAATAGATAAATAATGGCAAGAAGTTACAGTTACGAT
TTAAGAATGAAGCTATTCAA

Product: putative conjugative transfer protein TraH

Products: NA

Alternate protein names: F Pilus Assembly Protein TraH

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MRDSIMSMTGTIVVTNNNVHFYDSLAQDEKSWISHLKGGESASIYSCDSVSCLHPSRQRNITISPEQSYGGRAKQKLTDL
KIKFDNNYEFTNSEIGFLSSIGDIFPIYDYIART

Sequences:

>Translated_114_residues
MRDSIMSMTGTIVVTNNNVHFYDSLAQDEKSWISHLKGGESASIYSCDSVSCLHPSRQRNITISPEQSYGGRAKQKLTDL
KIKFDNNYEFTNSEIGFLSSIGDIFPIYDYIART
>Mature_114_residues
MRDSIMSMTGTIVVTNNNVHFYDSLAQDEKSWISHLKGGESASIYSCDSVSCLHPSRQRNITISPEQSYGGRAKQKLTDL
KIKFDNNYEFTNSEIGFLSSIGDIFPIYDYIART

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12867; Mature: 12867

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDSIMSMTGTIVVTNNNVHFYDSLAQDEKSWISHLKGGESASIYSCDSVSCLHPSRQRN
CCCCCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHHCCCCCCEEEECCCEEECCCCCCCC
ITISPEQSYGGRAKQKLTDLKIKFDNNYEFTNSEIGFLSSIGDIFPIYDYIART
EEECCCCCCCCCCHHEEEEEEEEECCCEEECCCCCCHHHHHCCHHHHHHHHHCC
>Mature Secondary Structure
MRDSIMSMTGTIVVTNNNVHFYDSLAQDEKSWISHLKGGESASIYSCDSVSCLHPSRQRN
CCCCCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHHCCCCCCEEEECCCEEECCCCCCCC
ITISPEQSYGGRAKQKLTDLKIKFDNNYEFTNSEIGFLSSIGDIFPIYDYIART
EEECCCCCCCCCCHHEEEEEEEEECCCEEECCCCCCHHHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA