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The map label for this gene is ykfC [C]

Identifier: 189184600

GI number: 189184600

Start: 1719514

End: 1719780

Strand: Direct

Name: ykfC [C]

Synonym: OTT_1693

Alternate gene names: 189184600

Gene position: 1719514-1719780 (Clockwise)

Preceding gene: 189184599

Following gene: 189184602

Centisome position: 85.59

GC content: 32.58

Gene sequence:

>267_bases
GTGATTGAAATTCTAAGTAAAAGGACTGCAGGAATAGATAAAGAAATCTTGAATACCTTTGATATTAAATCTCAGGCAAT
AATTAACTTGAGGCAACATGTGTATAATCCATATTCTCTTAGTAAGAAAAGACCGCTTGGTATACCTACTGTGAAAGATA
GAACTATGCAAGCTATTTACAAGCTAGTATTAAAACCAGTTGCAGAAACAACAGCAGATAAACATTCGTATTGGTTTAGA
ACAGAAAAATCAGCTAGTCATAGCTAA

Upstream 100 bases:

>100_bases
TATCGTAAAAGCAACAAAGGAAGGTAGATGAGGCAAAGTTAAAGCTTCGCAACGGCTACTGATTCACTCTTTTAGTGGTA
AAGCTCTTGCTGTTAGAAGA

Downstream 100 bases:

>100_bases
ACAATTATAACTGTTTTATAGTGGCTTAGCTATATAGTAGGTGCGTCAAGATAAGGTGAATTAATCTTACTGGTGAAAGT
CCAGTTATGGAAGGAGAAGC

Product: reverse transcriptase

Products: NA

Alternate protein names: Reverse Transcriptase; Reverse Transcriptase/Maturase-Like Protein; Group II Intron-Associated Open Reading Frame; Maturase; Retron-Type Reverse Transcriptase-Like Protein; Group II Intron-Encoding Maturase; Group II Intron Reverse Transcriptase/Maturase

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MIEILSKRTAGIDKEILNTFDIKSQAIINLRQHVYNPYSLSKKRPLGIPTVKDRTMQAIYKLVLKPVAETTADKHSYWFR
TEKSASHS

Sequences:

>Translated_88_residues
MIEILSKRTAGIDKEILNTFDIKSQAIINLRQHVYNPYSLSKKRPLGIPTVKDRTMQAIYKLVLKPVAETTADKHSYWFR
TEKSASHS
>Mature_88_residues
MIEILSKRTAGIDKEILNTFDIKSQAIINLRQHVYNPYSLSKKRPLGIPTVKDRTMQAIYKLVLKPVAETTADKHSYWFR
TEKSASHS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10132; Mature: 10132

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEILSKRTAGIDKEILNTFDIKSQAIINLRQHVYNPYSLSKKRPLGIPTVKDRTMQAIY
CCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
KLVLKPVAETTADKHSYWFRTEKSASHS
HHHHHHHHHHCCCCCCCEEECCCCCCCC
>Mature Secondary Structure
MIEILSKRTAGIDKEILNTFDIKSQAIINLRQHVYNPYSLSKKRPLGIPTVKDRTMQAIY
CCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
KLVLKPVAETTADKHSYWFRTEKSASHS
HHHHHHHHHHCCCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA