Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184577

Identifier: 189184577

GI number: 189184577

Start: 1696158

End: 1697111

Strand: Direct

Name: 189184577

Synonym: OTT_1670

Alternate gene names: NA

Gene position: 1696158-1697111 (Clockwise)

Preceding gene: 189184576

Following gene: 189184578

Centisome position: 84.43

GC content: 30.5

Gene sequence:

>954_bases
ATGTATACACGTGATCTTACCGTTTGTGTAGCAATAGTTCAATATTTAGGGCATTATGTCCTTTATAGTATAAATAATAT
ACTCCCAAGTATTGCAAGTAATGATCAGTTTCGTAGTAATTTGCCAGCAGATCTTTTCAATGGTACTATGAATGGTATTC
ATGTAGACTGCGGAAGGTCAATTACTTTTGATTATTATGTAGTAAACTATCCAAGAAGCTATAGTTTATTTATAAATGTT
ATGAGTGTCAATTACTCTTTAATAATAGAGCAAAAAATTCTTCAATTACTATCCCTTTCTAGTACTGCTGTATCATCAAT
TTTACAGCCAAATGGTAATCAAGATCAAGTAGACGCTAAAAAAGTTTTTTTAGTTTCACGCTTTTCTTATAGTACATCTA
TAAATGTTGTTGGTTGTTATACAAATCCAGAAGTTCATACTTTCTCATCAAAAAATCTAACACGTGTTAGCAAATTACCA
TCATTTGGCAGTTATAAAGATCCAGAAAATTTTAAATTGCTATCAGCAATACATGGACCAGCGCTATCAATCTTAAAAAA
TTTTCTGACTACATCAGATTTAACAGTTAAACTCTCTCCTGAAAATCAATTAATATTTACAGAATTCTTTTCTATTTTTA
CCTGCGAAGTACAACGTAATTTAGCTACCATACTAACATTACCAATGTGTTTTGAGTTATATAACCATTTTTTAAGTAAA
AAGAACGACTATGGAACTTTTGAACGGTATCCTCAAGTTCACCTACCACAAGAATTGCTAATGCTAACATTTCAGGATTA
TTTCCCTATGTCTGCACCAAATGCAGTTTCTGCAAGTATTGGCTTAACTAGAAATATGAATCAGGTTATATCAGAAATAT
TCATAGATGAAGATAAAGTTAATATAGCAGAAAAGCATAAACATCTATATACCCTGTGTTCAGAAAACTACTAA

Upstream 100 bases:

>100_bases
GCTATGCAAATAGCTTTTCAAGAAAAAATAATAGAAGAATTAGGAGTATCAAATATATATCTTGATGAAAGCATATAGTG
TATGTATGTGATTATAAATA

Downstream 100 bases:

>100_bases
GCCTGACGCATGGTTAGGGCGTACTTATATTATTATACTGCAATCATTGATAAAAGATTGGTTACGTTATATTCATGGAG
TAGATTTTCAAGATCTCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MYTRDLTVCVAIVQYLGHYVLYSINNILPSIASNDQFRSNLPADLFNGTMNGIHVDCGRSITFDYYVVNYPRSYSLFINV
MSVNYSLIIEQKILQLLSLSSTAVSSILQPNGNQDQVDAKKVFLVSRFSYSTSINVVGCYTNPEVHTFSSKNLTRVSKLP
SFGSYKDPENFKLLSAIHGPALSILKNFLTTSDLTVKLSPENQLIFTEFFSIFTCEVQRNLATILTLPMCFELYNHFLSK
KNDYGTFERYPQVHLPQELLMLTFQDYFPMSAPNAVSASIGLTRNMNQVISEIFIDEDKVNIAEKHKHLYTLCSENY

Sequences:

>Translated_317_residues
MYTRDLTVCVAIVQYLGHYVLYSINNILPSIASNDQFRSNLPADLFNGTMNGIHVDCGRSITFDYYVVNYPRSYSLFINV
MSVNYSLIIEQKILQLLSLSSTAVSSILQPNGNQDQVDAKKVFLVSRFSYSTSINVVGCYTNPEVHTFSSKNLTRVSKLP
SFGSYKDPENFKLLSAIHGPALSILKNFLTTSDLTVKLSPENQLIFTEFFSIFTCEVQRNLATILTLPMCFELYNHFLSK
KNDYGTFERYPQVHLPQELLMLTFQDYFPMSAPNAVSASIGLTRNMNQVISEIFIDEDKVNIAEKHKHLYTLCSENY
>Mature_317_residues
MYTRDLTVCVAIVQYLGHYVLYSINNILPSIASNDQFRSNLPADLFNGTMNGIHVDCGRSITFDYYVVNYPRSYSLFINV
MSVNYSLIIEQKILQLLSLSSTAVSSILQPNGNQDQVDAKKVFLVSRFSYSTSINVVGCYTNPEVHTFSSKNLTRVSKLP
SFGSYKDPENFKLLSAIHGPALSILKNFLTTSDLTVKLSPENQLIFTEFFSIFTCEVQRNLATILTLPMCFELYNHFLSK
KNDYGTFERYPQVHLPQELLMLTFQDYFPMSAPNAVSASIGLTRNMNQVISEIFIDEDKVNIAEKHKHLYTLCSENY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36036; Mature: 36036

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTRDLTVCVAIVQYLGHYVLYSINNILPSIASNDQFRSNLPADLFNGTMNGIHVDCGRS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHCCCCCCEEEECCCE
ITFDYYVVNYPRSYSLFINVMSVNYSLIIEQKILQLLSLSSTAVSSILQPNGNQDQVDAK
EEEEEEEEECCCCEEEEEEEEECCEEEEEHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHH
KVFLVSRFSYSTSINVVGCYTNPEVHTFSSKNLTRVSKLPSFGSYKDPENFKLLSAIHGP
HEEEEEEECCCCEEEEEEEECCCCEEEECCCCCHHHHHCCCCCCCCCCCCHHHHHHHCCH
ALSILKNFLTTSDLTVKLSPENQLIFTEFFSIFTCEVQRNLATILTLPMCFELYNHFLSK
HHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KNDYGTFERYPQVHLPQELLMLTFQDYFPMSAPNAVSASIGLTRNMNQVISEIFIDEDKV
CCCCCCHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHCCCCCCHHHHHHHHHCCCCCC
NIAEKHKHLYTLCSENY
CHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MYTRDLTVCVAIVQYLGHYVLYSINNILPSIASNDQFRSNLPADLFNGTMNGIHVDCGRS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHCCCCCCEEEECCCE
ITFDYYVVNYPRSYSLFINVMSVNYSLIIEQKILQLLSLSSTAVSSILQPNGNQDQVDAK
EEEEEEEEECCCCEEEEEEEEECCEEEEEHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHH
KVFLVSRFSYSTSINVVGCYTNPEVHTFSSKNLTRVSKLPSFGSYKDPENFKLLSAIHGP
HEEEEEEECCCCEEEEEEEECCCCEEEECCCCCHHHHHCCCCCCCCCCCCHHHHHHHCCH
ALSILKNFLTTSDLTVKLSPENQLIFTEFFSIFTCEVQRNLATILTLPMCFELYNHFLSK
HHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KNDYGTFERYPQVHLPQELLMLTFQDYFPMSAPNAVSASIGLTRNMNQVISEIFIDEDKV
CCCCCCHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHCCCCCCHHHHHHHHHCCCCCC
NIAEKHKHLYTLCSENY
CHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA