| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184576
Identifier: 189184576
GI number: 189184576
Start: 1695716
End: 1696135
Strand: Direct
Name: 189184576
Synonym: OTT_1669
Alternate gene names: NA
Gene position: 1695716-1696135 (Clockwise)
Preceding gene: 189184572
Following gene: 189184577
Centisome position: 84.41
GC content: 30.0
Gene sequence:
>420_bases ATGAAACCTAAGGGTGGTTTTAAATTCAAATCTTCTAGTTGCAACTCTAATAGCGACTTCAAGTTTAAGAGCAATGGTCC TCCTGGCTTGTTTTCTAAGATATATAAGTGTTATATAAATGAAATTGAGCGTACAATCTGTAATGCAAAAATATATGTTC CTCAAAACCAGTTTTTATATGAATTATCAAAGAAGATACAAGGGCATGGCAGTAATGCTAATGACATGATTGAATTTTTA GAAGAGAATCGATCCGTTTTGAAAAGCTTCTTTGGTAAGAAAGATAATGGTGTTAATAGTAATTACAATTACATTTGCAT AATAACAAATGAAGAACATCCCGCTATGCAAATAGCTTTTCAAGAAAAAATAATAGAAGAATTAGGAGTATCAAATATAT ATCTTGATGAAAGCATATAG
Upstream 100 bases:
>100_bases TAAAATATTTTAATTTTTACTAGACGTGATTAACTGTATAATTTATACTTATGTTAGTAAGTGATTTATTAACTAATAAG TATAGGTGGAGGTAAATATT
Downstream 100 bases:
>100_bases TGTATGTATGTGATTATAAATAATGTATACACGTGATCTTACCGTTTGTGTAGCAATAGTTCAATATTTAGGGCATTATG TCCTTTATAGTATAAATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MKPKGGFKFKSSSCNSNSDFKFKSNGPPGLFSKIYKCYINEIERTICNAKIYVPQNQFLYELSKKIQGHGSNANDMIEFL EENRSVLKSFFGKKDNGVNSNYNYICIITNEEHPAMQIAFQEKIIEELGVSNIYLDESI
Sequences:
>Translated_139_residues MKPKGGFKFKSSSCNSNSDFKFKSNGPPGLFSKIYKCYINEIERTICNAKIYVPQNQFLYELSKKIQGHGSNANDMIEFL EENRSVLKSFFGKKDNGVNSNYNYICIITNEEHPAMQIAFQEKIIEELGVSNIYLDESI >Mature_139_residues MKPKGGFKFKSSSCNSNSDFKFKSNGPPGLFSKIYKCYINEIERTICNAKIYVPQNQFLYELSKKIQGHGSNANDMIEFL EENRSVLKSFFGKKDNGVNSNYNYICIITNEEHPAMQIAFQEKIIEELGVSNIYLDESI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15900; Mature: 15900
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPKGGFKFKSSSCNSNSDFKFKSNGPPGLFSKIYKCYINEIERTICNAKIYVPQNQFLY CCCCCCCEECCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHH ELSKKIQGHGSNANDMIEFLEENRSVLKSFFGKKDNGVNSNYNYICIITNEEHPAMQIAF HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHH QEKIIEELGVSNIYLDESI HHHHHHHHCCCEEEECCCC >Mature Secondary Structure MKPKGGFKFKSSSCNSNSDFKFKSNGPPGLFSKIYKCYINEIERTICNAKIYVPQNQFLY CCCCCCCEECCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHH ELSKKIQGHGSNANDMIEFLEENRSVLKSFFGKKDNGVNSNYNYICIITNEEHPAMQIAF HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHH QEKIIEELGVSNIYLDESI HHHHHHHHCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA