Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

Click here to switch to the map view.

The map label for this gene is 189184481

Identifier: 189184481

GI number: 189184481

Start: 1602755

End: 1603063

Strand: Direct

Name: 189184481

Synonym: OTT_1574

Alternate gene names: NA

Gene position: 1602755-1603063 (Clockwise)

Preceding gene: 189184471

Following gene: 189184482

Centisome position: 79.78

GC content: 28.8

Gene sequence:

>309_bases
GTGACTTTTAAGATAAAATTGTTTTTTAGAATGTCTAATGTCTATATGAATAAAGATGAGCAGCAGAGAATTATAAAGAG
ATTGATATATCGAGCAACGTATCGCGGATGTAAAGAAAGTGATCTTTTGTTAAGCAAATTTTTAAGTAAGCATCTTGAAT
TTCTTAGCGATAAAGAACTACTAGACTTTGCATTAATTTTGGATTGCGATGACAAAGACATTTATGAATGGACAACAAAT
AAAAACCCCTCCCCCAAACATTTAAATAAAAAATTAATTAGCATGTTAAAAAGTATAGAACAGTTATAG

Upstream 100 bases:

>100_bases
TAGTATAATTTTTGAACTATATATTCCTGAAGTTGGATATTTATTGTTAATACTGGCTATTTTATTAATTATAATGTTCT
AGTAAAATAAAGTTTTAAAT

Downstream 100 bases:

>100_bases
TAACCCTTGTATGATAAAATTCATGATCTGGATATTTTGCTGATCACTCTTATCAAACCACTGCTAATTACTGCTAATTT
AATCAATTGAACTGAATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 102; Mature: 101

Protein sequence:

>102_residues
MTFKIKLFFRMSNVYMNKDEQQRIIKRLIYRATYRGCKESDLLLSKFLSKHLEFLSDKELLDFALILDCDDKDIYEWTTN
KNPSPKHLNKKLISMLKSIEQL

Sequences:

>Translated_102_residues
MTFKIKLFFRMSNVYMNKDEQQRIIKRLIYRATYRGCKESDLLLSKFLSKHLEFLSDKELLDFALILDCDDKDIYEWTTN
KNPSPKHLNKKLISMLKSIEQL
>Mature_101_residues
TFKIKLFFRMSNVYMNKDEQQRIIKRLIYRATYRGCKESDLLLSKFLSKHLEFLSDKELLDFALILDCDDKDIYEWTTNK
NPSPKHLNKKLISMLKSIEQL

Specific function: Unknown

COG id: COG2938

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12281; Mature: 12149

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFKIKLFFRMSNVYMNKDEQQRIIKRLIYRATYRGCKESDLLLSKFLSKHLEFLSDKEL
CEEEEEEEEEECHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHH
LDFALILDCDDKDIYEWTTNKNPSPKHLNKKLISMLKSIEQL
HHHHEEEECCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TFKIKLFFRMSNVYMNKDEQQRIIKRLIYRATYRGCKESDLLLSKFLSKHLEFLSDKEL
EEEEEEEEEECHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHH
LDFALILDCDDKDIYEWTTNKNPSPKHLNKKLISMLKSIEQL
HHHHEEEECCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA