| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184439
Identifier: 189184439
GI number: 189184439
Start: 1559621
End: 1559806
Strand: Direct
Name: 189184439
Synonym: OTT_1532
Alternate gene names: NA
Gene position: 1559621-1559806 (Clockwise)
Preceding gene: 189184438
Following gene: 189184441
Centisome position: 77.63
GC content: 26.88
Gene sequence:
>186_bases GTGATTACTGATACAGGATATCAAGGTATACAAAAAATTTACAATAATTCTGAATTACAAAAGAAAAAAAGCAAGAAAAA TCCTTTAACTAAAAATGATAAAAAGAATAATCATAGGTTAGCAGGAGAAAGAGTTGTCAATGAAAACGTTATTGGTATGC TAAAAACGGTTCAAAATTATTGCTGA
Upstream 100 bases:
>100_bases AAACTTCATTGTAAATGACTATACAGATTTTTCTAACGGTAAAAAACATGACTTTAGATTATTTAAGAAATCCAAAATTC TTATCAATCCTAAGGTTAAA
Downstream 100 bases:
>100_bases AAATATCGAAATAGACGTAAAAGATTCGGTCTTAGATTTAATTTGATCTCTGGCATTTATAATTTTGATCTACCTTAACC AGTTTCGAAAGAGGTCTAAT
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 61; Mature: 61
Protein sequence:
>61_residues MITDTGYQGIQKIYNNSELQKKKSKKNPLTKNDKKNNHRLAGERVVNENVIGMLKTVQNYC
Sequences:
>Translated_61_residues MITDTGYQGIQKIYNNSELQKKKSKKNPLTKNDKKNNHRLAGERVVNENVIGMLKTVQNYC >Mature_61_residues MITDTGYQGIQKIYNNSELQKKKSKKNPLTKNDKKNNHRLAGERVVNENVIGMLKTVQNYC
Specific function: Unknown
COG id: COG3293
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7038; Mature: 7038
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITDTGYQGIQKIYNNSELQKKKSKKNPLTKNDKKNNHRLAGERVVNENVIGMLKTVQNY CCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC C C >Mature Secondary Structure MITDTGYQGIQKIYNNSELQKKKSKKNPLTKNDKKNNHRLAGERVVNENVIGMLKTVQNY CCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC C C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA