| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184422
Identifier: 189184422
GI number: 189184422
Start: 1545218
End: 1546111
Strand: Direct
Name: 189184422
Synonym: OTT_1515
Alternate gene names: NA
Gene position: 1545218-1546111 (Clockwise)
Preceding gene: 189184421
Following gene: 189184428
Centisome position: 76.92
GC content: 28.19
Gene sequence:
>894_bases ATGATTATTCGAATTATCTTACTTTTAGTAAGCATTTTAACAATTAAAGTACAAGCTTTTCCAGTTTATAATACAAGTAA TATTAGCGCTTTTAAAGAGCTGATAACTTCTGGAGAAAATACTATTCAACTCTTGCTGACAACAATTACTGCAACATCTA ATACAAAATTTCACAAGCTTAAAGAAATATATAGTAAACAGAATTTAAATAGATCATTTGTTAATAAGTTGAATAAAAAC TATCTTGAAGACCAAGGAACACAGTTACTAGTGTTACTACATGGCCTAAGTAAAACTAGTAAATCTTTAAGAGGAATGGA GAAATTTTCTTACAAACAAGGATTCAAAGTATTAAACATTGATTATCCATCTACTAAGTTTCCAATAGAGCATCTAGTAG ATATAATCCATGATAAAATTACTCTCAGCCTTCAACAGCAAAAATATACAAGCATTTCATTTGTTGGAGTTTCTATGGGA GGTCTAGTCATAAGAGCTTATTTACACAAGTATAAAATACCTAATTTAGGAAAAGTAGTATTAATAGGCACACCTAATAA AGGAAGTGAAGTAGCAGATTATCTAAAAAATAATAAACTTTATAAAAAATTTACCGGTCCTGCTGGTCAACAATTAATCA CTAATCAAAAAGAATTTAATAATATTTTTGGCGATATATATTACGAGTGTGGAGTAATATCAGGTAATCTACCACTGGAT CTTTGTTGTATATTTATGAAAGGAAAACCAAGCGATGGTAAAGTAACTATAGAAAGCACTAAAATTGAAGGCATGCAAGA CCATATAGTACTAAAAATTCCTCATTGGTATTTAGAAAAGAGTAAAAAAGTGTGGCTTTATACTTTATATTTTCTTAAAT ATTCAAAATTTTGA
Upstream 100 bases:
>100_bases GATTTTGTTTGATTAATAATTAAAAATAGCTCTACCAACTGAAAATTTTCATTAATTTGCAATTTTCTAAAAAATAACCT AAAAGTTATAGAAAATAATA
Downstream 100 bases:
>100_bases AAATCAATTAAGATTTCTGCGCAAACTTAACTTTATATTGAATATCAAGTAGGCTTTGCTTTAAGGAGTTGCTATCATTA CCTAACATAGCTGCACGATT
Product: putative lipase LipB
Products: NA
Alternate protein names: Acetyltransferase Or Hydrolase; PGAP1 Family Protein; Pgap1 Family Protein; Alpha/Beta Hydrolase; Triacylglycerol Lipase; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Fold Superfamily Hydrolase/Acyltransferase; Alpha/Beta Family Hydrolase; Lipase LipB
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MIIRIILLLVSILTIKVQAFPVYNTSNISAFKELITSGENTIQLLLTTITATSNTKFHKLKEIYSKQNLNRSFVNKLNKN YLEDQGTQLLVLLHGLSKTSKSLRGMEKFSYKQGFKVLNIDYPSTKFPIEHLVDIIHDKITLSLQQQKYTSISFVGVSMG GLVIRAYLHKYKIPNLGKVVLIGTPNKGSEVADYLKNNKLYKKFTGPAGQQLITNQKEFNNIFGDIYYECGVISGNLPLD LCCIFMKGKPSDGKVTIESTKIEGMQDHIVLKIPHWYLEKSKKVWLYTLYFLKYSKF
Sequences:
>Translated_297_residues MIIRIILLLVSILTIKVQAFPVYNTSNISAFKELITSGENTIQLLLTTITATSNTKFHKLKEIYSKQNLNRSFVNKLNKN YLEDQGTQLLVLLHGLSKTSKSLRGMEKFSYKQGFKVLNIDYPSTKFPIEHLVDIIHDKITLSLQQQKYTSISFVGVSMG GLVIRAYLHKYKIPNLGKVVLIGTPNKGSEVADYLKNNKLYKKFTGPAGQQLITNQKEFNNIFGDIYYECGVISGNLPLD LCCIFMKGKPSDGKVTIESTKIEGMQDHIVLKIPHWYLEKSKKVWLYTLYFLKYSKF >Mature_297_residues MIIRIILLLVSILTIKVQAFPVYNTSNISAFKELITSGENTIQLLLTTITATSNTKFHKLKEIYSKQNLNRSFVNKLNKN YLEDQGTQLLVLLHGLSKTSKSLRGMEKFSYKQGFKVLNIDYPSTKFPIEHLVDIIHDKITLSLQQQKYTSISFVGVSMG GLVIRAYLHKYKIPNLGKVVLIGTPNKGSEVADYLKNNKLYKKFTGPAGQQLITNQKEFNNIFGDIYYECGVISGNLPLD LCCIFMKGKPSDGKVTIESTKIEGMQDHIVLKIPHWYLEKSKKVWLYTLYFLKYSKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33879; Mature: 33879
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIRIILLLVSILTIKVQAFPVYNTSNISAFKELITSGENTIQLLLTTITATSNTKFHKL CHHHHHHHHHHHHHEEEEEEEEECCCCHHHHHHHHHCCCCEEEEEEEEEECCCCCHHHHH KEIYSKQNLNRSFVNKLNKNYLEDQGTQLLVLLHGLSKTSKSLRGMEKFSYKQGFKVLNI HHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEE DYPSTKFPIEHLVDIIHDKITLSLQQQKYTSISFVGVSMGGLVIRAYLHKYKIPNLGKVV CCCCCCCCHHHHHHHHHHHHEEEEHHCCCCEEEEEEECHHHHHHHHHHHHCCCCCCCEEE LIGTPNKGSEVADYLKNNKLYKKFTGPAGQQLITNQKEFNNIFGDIYYECGVISGNLPLD EEECCCCCHHHHHHHHCCCEEEECCCCCCHHHHCCHHHHHHHHHHHHEEEEEEECCCCCE LCCIFMKGKPSDGKVTIESTKIEGMQDHIVLKIPHWYLEKSKKVWLYTLYFLKYSKF EEEEEEECCCCCCEEEEEEEECCCCCCCEEEEECHHHHCCCCCEEEEEEEEHHHCCC >Mature Secondary Structure MIIRIILLLVSILTIKVQAFPVYNTSNISAFKELITSGENTIQLLLTTITATSNTKFHKL CHHHHHHHHHHHHHEEEEEEEEECCCCHHHHHHHHHCCCCEEEEEEEEEECCCCCHHHHH KEIYSKQNLNRSFVNKLNKNYLEDQGTQLLVLLHGLSKTSKSLRGMEKFSYKQGFKVLNI HHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEE DYPSTKFPIEHLVDIIHDKITLSLQQQKYTSISFVGVSMGGLVIRAYLHKYKIPNLGKVV CCCCCCCCHHHHHHHHHHHHEEEEHHCCCCEEEEEEECHHHHHHHHHHHHCCCCCCCEEE LIGTPNKGSEVADYLKNNKLYKKFTGPAGQQLITNQKEFNNIFGDIYYECGVISGNLPLD EEECCCCCHHHHHHHHCCCEEEECCCCCCHHHHCCHHHHHHHHHHHHEEEEEEECCCCCE LCCIFMKGKPSDGKVTIESTKIEGMQDHIVLKIPHWYLEKSKKVWLYTLYFLKYSKF EEEEEEECCCCCCEEEEEEEECCCCCCCEEEEECHHHHCCCCCEEEEEEEEHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA