| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184362
Identifier: 189184362
GI number: 189184362
Start: 1487257
End: 1487646
Strand: Direct
Name: 189184362
Synonym: OTT_1455
Alternate gene names: NA
Gene position: 1487257-1487646 (Clockwise)
Preceding gene: 189184358
Following gene: 189184363
Centisome position: 74.03
GC content: 28.72
Gene sequence:
>390_bases ATGGCAAGAAGATACAGTTATGATTTAAGAATGAAGATATTCAAAGCGAAAGAATTAAGTATTATACTAGGTAATAGATT ACAAAGAACTAGAATAAATTATTATAGAAAACTACTAGGATACACTTATAAAAAAACTCATCTTCATTCCAAAAGGGATA TTGTGTTAAGGAATGAATTTATAGAGAAGATAAAGCAATTTTCTAAAGAAGGTCTAGTATTCATTGATGAGTTAGGAATA GAGGATAATGCTTGTAGAGAATATGGATGGAGTATAAAAGGTACTAGATGTTATGGCAATAAAGCTTATCAACATAAATC CAGGGTCAGTATGATAGCAGGGCTTTGTAATAATCAAATTATAGCACCAGTAATATTTGAAAGATATTAG
Upstream 100 bases:
>100_bases CTTTTTAACAATATTGCAAAATTTAGAATATAGCCTGAACGTAGGAAATAGGTACATAATATGCTAATATGAAAAGAGTA TAAAAAATAATAGATAAATA
Downstream 100 bases:
>100_bases TATGGCTTTAGAACACGTAATGAAGTTTATCTGATTGTACCTATTTCCTATGTTATTGCTATACCTACTATTATAGTGCA ACTTCATATGTCCATGAAAG
Product: transposase
Products: NA
Alternate protein names: Transposase And Inactivated Derivative
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MARRYSYDLRMKIFKAKELSIILGNRLQRTRINYYRKLLGYTYKKTHLHSKRDIVLRNEFIEKIKQFSKEGLVFIDELGI EDNACREYGWSIKGTRCYGNKAYQHKSRVSMIAGLCNNQIIAPVIFERY
Sequences:
>Translated_129_residues MARRYSYDLRMKIFKAKELSIILGNRLQRTRINYYRKLLGYTYKKTHLHSKRDIVLRNEFIEKIKQFSKEGLVFIDELGI EDNACREYGWSIKGTRCYGNKAYQHKSRVSMIAGLCNNQIIAPVIFERY >Mature_128_residues ARRYSYDLRMKIFKAKELSIILGNRLQRTRINYYRKLLGYTYKKTHLHSKRDIVLRNEFIEKIKQFSKEGLVFIDELGIE DNACREYGWSIKGTRCYGNKAYQHKSRVSMIAGLCNNQIIAPVIFERY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15407; Mature: 15276
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRYSYDLRMKIFKAKELSIILGNRLQRTRINYYRKLLGYTYKKTHLHSKRDIVLRNEF CCCCCCCHHEEEEECCCCEEEECCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHH IEKIKQFSKEGLVFIDELGIEDNACREYGWSIKGTRCYGNKAYQHKSRVSMIAGLCNNQI HHHHHHHCCCCCEEEEECCCCCCHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCE IAPVIFERY EEHEEECCC >Mature Secondary Structure ARRYSYDLRMKIFKAKELSIILGNRLQRTRINYYRKLLGYTYKKTHLHSKRDIVLRNEF CCCCCCHHEEEEECCCCEEEECCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHH IEKIKQFSKEGLVFIDELGIEDNACREYGWSIKGTRCYGNKAYQHKSRVSMIAGLCNNQI HHHHHHHCCCCCEEEEECCCCCCHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCE IAPVIFERY EEHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA