| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
Click here to switch to the map view.
The map label for this gene is llaDCHIA [H]
Identifier: 189184358
GI number: 189184358
Start: 1484740
End: 1485036
Strand: Direct
Name: llaDCHIA [H]
Synonym: OTT_1451
Alternate gene names: 189184358
Gene position: 1484740-1485036 (Clockwise)
Preceding gene: 189184352
Following gene: 189184362
Centisome position: 73.9
GC content: 32.66
Gene sequence:
>297_bases ATGGATTTTTCGTTTATAGAACCTAAAAAAGGTGACTTCGTTTATCTTGATCCACCTTATCACCAATCAGGAGAACGGTT CTACACTAGAGTCCCATTTGATGAAAAAGAGCAAATCAGACTACGAGATTTTGTATATGAACTCAACAATAAAGGTGTTA AAATTATGCTGTCAAATAATAACACTGCATTCATTAGAGACATATACAAAGACTTTTTCATCACTCATATTCCAGTCACA TACTCAATCAATCAACAACGAAACACTGTTAATGAGCTAATCATTACTAACTATTAG
Upstream 100 bases:
>100_bases ATCTGCTCAAACATTTTCTGATAAGCGATATCTTAAGCTTCATATTTGCTCTAAAATAAATAAATGTAGCAAACTTTTAA CCGATGTATCAATTTGCGCA
Downstream 100 bases:
>100_bases ACTTGAACTTAGCAATTAAAGGTGAAACCGCAACCCAAAACGTGTATGAATAGGAAGTGGTCTATAGTTCATTGTGCTAC ATTCAATATCTAAATATATA
Product: N6 adenine-specific DNA-methyltransferase
Products: NA
Alternate protein names: M.LlaDCHI A; M.LlaDCHIA; Adenine-specific methyltransferase LlaDCHIA; M.LlaII A [H]
Number of amino acids: Translated: 98; Mature: 98
Protein sequence:
>98_residues MDFSFIEPKKGDFVYLDPPYHQSGERFYTRVPFDEKEQIRLRDFVYELNNKGVKIMLSNNNTAFIRDIYKDFFITHIPVT YSINQQRNTVNELIITNY
Sequences:
>Translated_98_residues MDFSFIEPKKGDFVYLDPPYHQSGERFYTRVPFDEKEQIRLRDFVYELNNKGVKIMLSNNNTAFIRDIYKDFFITHIPVT YSINQQRNTVNELIITNY >Mature_98_residues MDFSFIEPKKGDFVYLDPPYHQSGERFYTRVPFDEKEQIRLRDFVYELNNKGVKIMLSNNNTAFIRDIYKDFFITHIPVT YSINQQRNTVNELIITNY
Specific function: This methylase recognizes the double-stranded sequence GATC, causes specific methylation on A-2 on both strands, and protects the DNA from cleavage by the LlaDCHI endonuclease [H]
COG id: COG0338
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023095 - InterPro: IPR002052 - InterPro: IPR012327 [H]
Pfam domain/function: PF02086 MethyltransfD12 [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 11823; Mature: 11823
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFSFIEPKKGDFVYLDPPYHQSGERFYTRVPFDEKEQIRLRDFVYELNNKGVKIMLSNN CCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECC NTAFIRDIYKDFFITHIPVTYSINQQRNTVNELIITNY CEEEHHHHHHHHEEEECCEEEEECCCCCCCCEEEEECC >Mature Secondary Structure MDFSFIEPKKGDFVYLDPPYHQSGERFYTRVPFDEKEQIRLRDFVYELNNKGVKIMLSNN CCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECC NTAFIRDIYKDFFITHIPVTYSINQQRNTVNELIITNY CEEEHHHHHHHHEEEECCEEEEECCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7793939; 11467810 [H]