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The map label for this gene is traU [H]

Identifier: 189184341

GI number: 189184341

Start: 1467309

End: 1467752

Strand: Direct

Name: traU [H]

Synonym: OTT_1434

Alternate gene names: 189184341

Gene position: 1467309-1467752 (Clockwise)

Preceding gene: 189184340

Following gene: 189184342

Centisome position: 73.04

GC content: 38.29

Gene sequence:

>444_bases
ATGAGTTGCAGCACTGGTTTATTAGCAAGTGATTATGCTTTTTGGTGTGCCGAATGTCAAGAAATGCTTTACCCTTTTAC
TGGAACTGCTGTAGCACATAATGGTGGAGTTGGAACGTCTGTATTAATGGTAAGTAAGTTTATGGCTAGAATGCATAGGC
AACTGATGTTATGGGGATATTATGGTTATAAAGGCCTATGTGGTAAGTATCCTATGCCTGTCATGAAGAAAAGCCAGTAT
CGACTACAAATGACTTATCCGATTCCAGAAACCAAATCCTGCAAAAGCATAGGTCAAACAGAAGCTACATGGCAAGCTGG
CAGAGAATTTCCAGTTAATGGTGAAGATTTTTGTTACTTGATTTTGCGAAAAGATGAAGATTTAACCTATCATAGCCGTA
ATCAGCTCAGCATAGAAAGTGTAACAGTGTTATTTCAAGCTTAA

Upstream 100 bases:

>100_bases
AACCAGTACGCCTTGTAGACGTTACAAAGTCACCAATGTGTATGGTAAGTCTTGGAGGTTTGTCATTGGAAGTGCTACTC
AAAAAGGCAGGGCTGATTGC

Downstream 100 bases:

>100_bases
AACAGTAAAAACAATTCCTTAACTCAACATAATATCAACGATCAAAATTATATAATAGCTAATTCAATGAGAATTGAATC
TGATCCTTTAAGTGCCCTTG

Product: putative conjugative transfer protein TraU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MSCSTGLLASDYAFWCAECQEMLYPFTGTAVAHNGGVGTSVLMVSKFMARMHRQLMLWGYYGYKGLCGKYPMPVMKKSQY
RLQMTYPIPETKSCKSIGQTEATWQAGREFPVNGEDFCYLILRKDEDLTYHSRNQLSIESVTVLFQA

Sequences:

>Translated_147_residues
MSCSTGLLASDYAFWCAECQEMLYPFTGTAVAHNGGVGTSVLMVSKFMARMHRQLMLWGYYGYKGLCGKYPMPVMKKSQY
RLQMTYPIPETKSCKSIGQTEATWQAGREFPVNGEDFCYLILRKDEDLTYHSRNQLSIESVTVLFQA
>Mature_146_residues
SCSTGLLASDYAFWCAECQEMLYPFTGTAVAHNGGVGTSVLMVSKFMARMHRQLMLWGYYGYKGLCGKYPMPVMKKSQYR
LQMTYPIPETKSCKSIGQTEATWQAGREFPVNGEDFCYLILRKDEDLTYHSRNQLSIESVTVLFQA

Specific function: Appears to be more essential to conjugal DNA transfer than to assembly of pilus filaments. Required for F plasmid conjugative transfer [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009649 [H]

Pfam domain/function: PF06834 TraU [H]

EC number: NA

Molecular weight: Translated: 16719; Mature: 16587

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
10.2 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
9.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCSTGLLASDYAFWCAECQEMLYPFTGTAVAHNGGVGTSVLMVSKFMARMHRQLMLWGY
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHEEEEE
YGYKGLCGKYPMPVMKKSQYRLQMTYPIPETKSCKSIGQTEATWQAGREFPVNGEDFCYL
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHCCCCCHHHHCCCCCCCCCCCEEEE
ILRKDEDLTYHSRNQLSIESVTVLFQA
EEECCCCCEECCCCCEEEEEEEEEEEC
>Mature Secondary Structure 
SCSTGLLASDYAFWCAECQEMLYPFTGTAVAHNGGVGTSVLMVSKFMARMHRQLMLWGY
CCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHEEEEE
YGYKGLCGKYPMPVMKKSQYRLQMTYPIPETKSCKSIGQTEATWQAGREFPVNGEDFCYL
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHCCCCCHHHHCCCCCCCCCCCEEEE
ILRKDEDLTYHSRNQLSIESVTVLFQA
EEECCCCCEECCCCCEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2198250; 7915817; 2050638; 1355084 [H]