| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184340
Identifier: 189184340
GI number: 189184340
Start: 1466998
End: 1467084
Strand: Direct
Name: 189184340
Synonym: OTT_1433
Alternate gene names: NA
Gene position: 1466998-1467084 (Clockwise)
Preceding gene: 189184339
Following gene: 189184341
Centisome position: 73.02
GC content: 36.78
Gene sequence:
>87_bases ATGGCTGCATTAAATGGAGTATTTAGCAATATTGCTAAGTTTCTGCAAGCTAAGGCTATTAAACCTGATATGCTACAGGC AAGCTAA
Upstream 100 bases:
>100_bases ATATTATTGAAAAGCAGGTGGAAGGCTGGTTGATATGCGAAGACGGATGTTCTGGAATTAAAGGAATCGTGGTAGATAAA TCGTCTAACATAGCAAGCGC
Downstream 100 bases:
>100_bases AGCAGTTCAAGGCGTAGACGTTGTTAACACTTCACCGAAAAAACCAAAAATGGTAGACTTATATGTCTTTGTCCAAAACC AGGAATTCCAATACCTGTAC
Product: putative conjugative transfer protein TraB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 28; Mature: 27
Protein sequence:
>28_residues MAALNGVFSNIAKFLQAKAIKPDMLQAS
Sequences:
>Translated_28_residues MAALNGVFSNIAKFLQAKAIKPDMLQAS >Mature_27_residues AALNGVFSNIAKFLQAKAIKPDMLQAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 2979; Mature: 2847
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.1 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALNGVFSNIAKFLQAKAIKPDMLQAS CCCHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure AALNGVFSNIAKFLQAKAIKPDMLQAS CCHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA