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The map label for this gene is traA [H]

Identifier: 189184319

GI number: 189184319

Start: 1448242

End: 1449012

Strand: Direct

Name: traA [H]

Synonym: OTT_1412

Alternate gene names: 189184319

Gene position: 1448242-1449012 (Clockwise)

Preceding gene: 189184315

Following gene: 189184320

Centisome position: 72.09

GC content: 33.46

Gene sequence:

>771_bases
ATGAAGTTTGCTGAGAGTAATATTTTAAGCGGTATAACCTTACTAAGGCAAAATAACTGCGTTAAGTTTGATAATACGTT
GCAGGACTCAATGAGTAAGTTAGTATACAACTGGAGTCTAAGCAAATTTAACCCACATGAAAAATTGGTAATTACAGTAC
GTAATAAAGATGTCGACATTCTTAATTCAAGTATTAGATCTTTGTTAAAAGCAAATGGTACGCTACAAGGCAAAGAATAT
AGGCGTTCAATAGCTGGAAGGAAAGAGTCCTATATGGCAGGAGATAGAATCGTATTTCAAAAAAGCGATAAAGATTTACA
AATACAAAACAGTGAATTTGCAACTTTAACCTCGGTTAATAAAAATGAATTTGTAGCTAAGACAGACACAGGAAAAGAAG
TGAATTTTGACCCAAGCAAAATACAATTTAAACATGGCTATGCAAGTACTGTTTATAAGGTCCAGGGAGATTCTATAAAA
GATGTATACGTTTTTCATAATGGAGTAAGTAATATAAGCAGCTCATACGTAGCTATGACAAGGCATATAGAGAACTTACA
GTTATATTGCAATAAGGAAGCTACTGCAAGCATTAACAGCTTAATAAATCAGCTCAGCAGACCAAATGATAAAGAAGAAT
ATTATCATTTTACCGCTAAACCAGAGCAAGAAGCTAAAGCAGAAAAAGTCCAGCAAGAGAATAGCATAAAGCAATGCGCC
ACCAAAGATATTTCTACTCCATTATTTATGCAAATCAAAGAACAAAGATAG

Upstream 100 bases:

>100_bases
TAGAAAGAGGCGTAATGTTTGAGATTCTGAGTAATATTTTTGGTTCACATGTTTTAACAGATATTCGAAGAAAAGTGAAA
ACTGGAGCAGAGAAGCAGCA

Downstream 100 bases:

>100_bases
TATGATTATGATGTAACCATTTTGTCTGCAGAAGGAAAAGCGATATCAAGTTTTCATTAGGCTGGCATTGATAGCAGAAT
GGTATATAGTTCAAATGTAA

Product: putative conjugative transfer protein TraA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MKFAESNILSGITLLRQNNCVKFDNTLQDSMSKLVYNWSLSKFNPHEKLVITVRNKDVDILNSSIRSLLKANGTLQGKEY
RRSIAGRKESYMAGDRIVFQKSDKDLQIQNSEFATLTSVNKNEFVAKTDTGKEVNFDPSKIQFKHGYASTVYKVQGDSIK
DVYVFHNGVSNISSSYVAMTRHIENLQLYCNKEATASINSLINQLSRPNDKEEYYHFTAKPEQEAKAEKVQQENSIKQCA
TKDISTPLFMQIKEQR

Sequences:

>Translated_256_residues
MKFAESNILSGITLLRQNNCVKFDNTLQDSMSKLVYNWSLSKFNPHEKLVITVRNKDVDILNSSIRSLLKANGTLQGKEY
RRSIAGRKESYMAGDRIVFQKSDKDLQIQNSEFATLTSVNKNEFVAKTDTGKEVNFDPSKIQFKHGYASTVYKVQGDSIK
DVYVFHNGVSNISSSYVAMTRHIENLQLYCNKEATASINSLINQLSRPNDKEEYYHFTAKPEQEAKAEKVQQENSIKQCA
TKDISTPLFMQIKEQR
>Mature_256_residues
MKFAESNILSGITLLRQNNCVKFDNTLQDSMSKLVYNWSLSKFNPHEKLVITVRNKDVDILNSSIRSLLKANGTLQGKEY
RRSIAGRKESYMAGDRIVFQKSDKDLQIQNSEFATLTSVNKNEFVAKTDTGKEVNFDPSKIQFKHGYASTVYKVQGDSIK
DVYVFHNGVSNISSSYVAMTRHIENLQLYCNKEATASINSLINQLSRPNDKEEYYHFTAKPEQEAKAEKVQQENSIKQCA
TKDISTPLFMQIKEQR

Specific function: Unknown

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mobA/mobL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000606
- InterPro:   IPR005053
- InterPro:   IPR014136 [H]

Pfam domain/function: PF03389 MobA_MobL; PF01443 Viral_helicase1 [H]

EC number: NA

Molecular weight: Translated: 29229; Mature: 29229

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFAESNILSGITLLRQNNCVKFDNTLQDSMSKLVYNWSLSKFNPHEKLVITVRNKDVDI
CCCCHHHHHHHHHHEECCCCEECCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHH
LNSSIRSLLKANGTLQGKEYRRSIAGRKESYMAGDRIVFQKSDKDLQIQNSEFATLTSVN
HHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHCCCCEEEEEECCCCEEEECCCEEEEEECC
KNEFVAKTDTGKEVNFDPSKIQFKHGYASTVYKVQGDSIKDVYVFHNGVSNISSSYVAMT
CCCEEEECCCCCCCCCCCCCEEEECCCCEEEEEECCCCCEEEEEEECCHHHHHHHHHHHH
RHIENLQLYCNKEATASINSLINQLSRPNDKEEYYHFTAKPEQEAKAEKVQQENSIKQCA
HHHCCEEEEECCCHHHHHHHHHHHHCCCCCCHHEEEEECCCHHHHHHHHHHHHHHHHHHH
TKDISTPLFMQIKEQR
HHCCCCCEEEEEECCC
>Mature Secondary Structure
MKFAESNILSGITLLRQNNCVKFDNTLQDSMSKLVYNWSLSKFNPHEKLVITVRNKDVDI
CCCCHHHHHHHHHHEECCCCEECCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHH
LNSSIRSLLKANGTLQGKEYRRSIAGRKESYMAGDRIVFQKSDKDLQIQNSEFATLTSVN
HHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHCCCCEEEEEECCCCEEEECCCEEEEEECC
KNEFVAKTDTGKEVNFDPSKIQFKHGYASTVYKVQGDSIKDVYVFHNGVSNISSSYVAMT
CCCEEEECCCCCCCCCCCCCEEEECCCCEEEEEECCCCCEEEEEEECCHHHHHHHHHHHH
RHIENLQLYCNKEATASINSLINQLSRPNDKEEYYHFTAKPEQEAKAEKVQQENSIKQCA
HHHCCEEEEECCCHHHHHHHHHHHHCCCCCCHHEEEEECCCHHHHHHHHHHHHHHHHHHH
TKDISTPLFMQIKEQR
HHCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]