| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
Click here to switch to the map view.
The map label for this gene is 189184312
Identifier: 189184312
GI number: 189184312
Start: 1440465
End: 1440689
Strand: Reverse
Name: 189184312
Synonym: OTT_1405
Alternate gene names: NA
Gene position: 1440689-1440465 (Counterclockwise)
Preceding gene: 189184313
Following gene: 189184310
Centisome position: 71.71
GC content: 32.44
Gene sequence:
>225_bases ATGACTATACAACAAAAAGGTGAGTTATTGAGTCGTTTTGATGTTGCTAGCTATTTTCTGGTATTGGTTAATAGAGAAGC AGGAGATGTAATAACTCAATTGAAACTGCAAAGATTAGTGTATTTTATCCAAGGTGTACATCTAGCTTTATTTGATAAGC CTCTTTTTAAAGAAGATATTAGACCTCTTTCGAAACTGGTTAACGTAGTTCAAAATTATCGCTGA
Upstream 100 bases:
>100_bases TCTTGATTTTTCTGTAATAAGCAGGTATTATAAAGCATTATCATGATTTATTTGTGATACAAATTATTATAAAATAGTCA TAAGATATAATAATAAAATC
Downstream 100 bases:
>100_bases TAAATATCGAAATAGACGTAAAAGATTCGGTCTTAGATTTAATTTGATCTCTGGCATTTATAATTTTGATCTACTTTAAC CAGTTTCGAAAGAGGTCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 74; Mature: 73
Protein sequence:
>74_residues MTIQQKGELLSRFDVASYFLVLVNREAGDVITQLKLQRLVYFIQGVHLALFDKPLFKEDIRPLSKLVNVVQNYR
Sequences:
>Translated_74_residues MTIQQKGELLSRFDVASYFLVLVNREAGDVITQLKLQRLVYFIQGVHLALFDKPLFKEDIRPLSKLVNVVQNYR >Mature_73_residues TIQQKGELLSRFDVASYFLVLVNREAGDVITQLKLQRLVYFIQGVHLALFDKPLFKEDIRPLSKLVNVVQNYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8637; Mature: 8506
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIQQKGELLSRFDVASYFLVLVNREAGDVITQLKLQRLVYFIQGVHLALFDKPLFKEDI CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH RPLSKLVNVVQNYR HHHHHHHHHHHCCC >Mature Secondary Structure TIQQKGELLSRFDVASYFLVLVNREAGDVITQLKLQRLVYFIQGVHLALFDKPLFKEDI CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH RPLSKLVNVVQNYR HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA