Click here to switch to the map view.

The map label for this gene is infA [H]

Identifier: 189184283

GI number: 189184283

Start: 1401887

End: 1402111

Strand: Direct

Name: infA [H]

Synonym: OTT_1376

Alternate gene names: 189184283

Gene position: 1401887-1402111 (Clockwise)

Preceding gene: 189184270

Following gene: 189184284

Centisome position: 69.78

GC content: 33.33

Gene sequence:

>225_bases
ATGGCTAAAACAGAGCCTATTATAGTTACTGGCGAAGTTATTAAAGTTTTGCCTAAGGAAGCTAAATTTAAAGTAAAGTT
GTCTGACAGTGAGCACGTTATTACTGCGTATATTAGTGGCAAGATAAGAATGCATCACATTAAGATTATAAGAGGTGATA
AGGTAGATGTTGAAATGACACCTTATGATTTAAATATGGGAAGGATTACACATCGTCACAAATAA

Upstream 100 bases:

>100_bases
CCATGCGTTACTCATGTTACTTAAAATAAGTAATACACAAGGTTAATTAGTTAACATGAAAAATAATTACAGTTTATTAT
AAATGCATAATAATTGAATT

Downstream 100 bases:

>100_bases
TTTTAATAGTCAATAATATACTTGGTATATTCTATGGATTTAATGCCTATTATACTAGCATCTCAATCTGAGTCTAGGTT
GAAACTGCTAAAAAGAATTA

Product: translation initiation factor IF-1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 73

Protein sequence:

>74_residues
MAKTEPIIVTGEVIKVLPKEAKFKVKLSDSEHVITAYISGKIRMHHIKIIRGDKVDVEMTPYDLNMGRITHRHK

Sequences:

>Translated_74_residues
MAKTEPIIVTGEVIKVLPKEAKFKVKLSDSEHVITAYISGKIRMHHIKIIRGDKVDVEMTPYDLNMGRITHRHK
>Mature_73_residues
AKTEPIIVTGEVIKVLPKEAKFKVKLSDSEHVITAYISGKIRMHHIKIIRGDKVDVEMTPYDLNMGRITHRHK

Specific function: No specific function has so far been attributed to this initiation factor; however, it seems to stimulate more or less all the activities of the other two initiation factors, IF-2 and IF-3 [H]

COG id: COG0361

COG function: function code J; Translation initiation factor 1 (IF-1)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787110, Length=74, Percent_Identity=50, Blast_Score=72, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR022967
- InterPro:   IPR006196
- InterPro:   IPR004368 [H]

Pfam domain/function: PF01176 eIF-1a [H]

EC number: NA

Molecular weight: Translated: 8493; Mature: 8362

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: PS50832 S1_IF1_TYPE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKTEPIIVTGEVIKVLPKEAKFKVKLSDSEHVITAYISGKIRMHHIKIIRGDKVDVEMT
CCCCCCEEEECCEEEECCCCCEEEEEECCCCEEEEEEEECEEEEEEEEEEECCEEEEEEC
PYDLNMGRITHRHK
CEECCCCCEEECCC
>Mature Secondary Structure 
AKTEPIIVTGEVIKVLPKEAKFKVKLSDSEHVITAYISGKIRMHHIKIIRGDKVDVEMT
CCCCCEEEECCEEEECCCCCEEEEEECCCCEEEEEEEECEEEEEEEEEEECCEEEEEEC
PYDLNMGRITHRHK
CEECCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA