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The map label for this gene is 189184272

Identifier: 189184272

GI number: 189184272

Start: 1394600

End: 1395040

Strand: Reverse

Name: 189184272

Synonym: OTT_1365

Alternate gene names: NA

Gene position: 1395040-1394600 (Counterclockwise)

Preceding gene: 189184273

Following gene: 189184271

Centisome position: 69.44

GC content: 30.39

Gene sequence:

>441_bases
ATGGCTACTAGTCCTAACCCTAACTCTAATACTAAAGTTGATTCAATTGATTTATACGTCAGTAAGCGTCTTAAAATGCG
TCGTGTAATACTTGGGCTTAGCCAAAAAAAGCTAGCTGAAGCAGTAGATGTAAGTATACAACAGATTCAGAAATACGAAA
AATCAACAAATCGTATATCTAGCGGTAAGTTATACAGTTTGGCAAATCTATTAAAGGTTCCAATAGGCTATTTCTTTGAA
AATGCAAGTAGTTATACTGATTGCAAGAATAATGTTAATACAATATCTGTATTTGCTGAAGATCAAGAGAATTTTCTATC
AGATGATACTGTGACGGAAAAAGAAGTATTAAATCTTATTAAAGCCTTTAATGAAGTTAAGAATTCACATGTTAGAAAAA
AAATTATTGACTTAGTAAAGAGTATTAAAGCTATGGAATAA

Upstream 100 bases:

>100_bases
TTAAGTAAATAAATAACTTTATAAATAAAATTATTGCTTGATTTTTATTGAATCTAATCTATAAATTAATGGCGAAGGTG
AACTATAAAGTGAAGTAATT

Downstream 100 bases:

>100_bases
TTTGATTAGGTTTTATGACGTACTTCAATGTATTAATACATTACCTGAAAGGAAAAGATATAATTCTGGAGAATAAGTTG
GAAGATATAATAATTTACAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MATSPNPNSNTKVDSIDLYVSKRLKMRRVILGLSQKKLAEAVDVSIQQIQKYEKSTNRISSGKLYSLANLLKVPIGYFFE
NASSYTDCKNNVNTISVFAEDQENFLSDDTVTEKEVLNLIKAFNEVKNSHVRKKIIDLVKSIKAME

Sequences:

>Translated_146_residues
MATSPNPNSNTKVDSIDLYVSKRLKMRRVILGLSQKKLAEAVDVSIQQIQKYEKSTNRISSGKLYSLANLLKVPIGYFFE
NASSYTDCKNNVNTISVFAEDQENFLSDDTVTEKEVLNLIKAFNEVKNSHVRKKIIDLVKSIKAME
>Mature_145_residues
ATSPNPNSNTKVDSIDLYVSKRLKMRRVILGLSQKKLAEAVDVSIQQIQKYEKSTNRISSGKLYSLANLLKVPIGYFFEN
ASSYTDCKNNVNTISVFAEDQENFLSDDTVTEKEVLNLIKAFNEVKNSHVRKKIIDLVKSIKAME

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 16507; Mature: 16376

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS50943 HTH_CROC1 ; PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATSPNPNSNTKVDSIDLYVSKRLKMRRVILGLSQKKLAEAVDVSIQQIQKYEKSTNRIS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
SGKLYSLANLLKVPIGYFFENASSYTDCKNNVNTISVFAEDQENFLSDDTVTEKEVLNLI
CCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEEECCHHHHCCCCCCCHHHHHHHH
KAFNEVKNSHVRKKIIDLVKSIKAME
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ATSPNPNSNTKVDSIDLYVSKRLKMRRVILGLSQKKLAEAVDVSIQQIQKYEKSTNRIS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
SGKLYSLANLLKVPIGYFFENASSYTDCKNNVNTISVFAEDQENFLSDDTVTEKEVLNLI
CCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEEECCHHHHCCCCCCCHHHHHHHH
KAFNEVKNSHVRKKIIDLVKSIKAME
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8868435 [H]