| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184248
Identifier: 189184248
GI number: 189184248
Start: 1366408
End: 1366956
Strand: Direct
Name: 189184248
Synonym: OTT_1341
Alternate gene names: NA
Gene position: 1366408-1366956 (Clockwise)
Preceding gene: 189184246
Following gene: 189184249
Centisome position: 68.01
GC content: 26.96
Gene sequence:
>549_bases ATGATTGATACAATATTAAAAGGATTAATACTGAATAGTTATCGAAGGTTCTTTATTGTATTAGCTATTGTTCCTGTTGT GAGTTTGTCTTTTGCTTACTATGTAGAATATATACTTGAAGTAGCTCCTTGTACTTTATGCACTTACCAAAGGTGGCCAT ATTATATGTTGTTTTTTTTAAGTATATTAGGTATATCATTCTCAAGGTTGAGTAATATTTTACATAAGGTTATAATATTG AATTTTGTAATATCTGCTCTTATATCAGGTTATCACTATGGAATAGAAAAAGAGATCTTTAGTGAACCTAAAACTTGTAA AGTTAATACAATAATGTCAGAAAATTTGTCAGTTAAAGAAAGAATTAAATTACTTGAAACTATACCTGTAGTTAAAAGTT GTAAAGCTGTTCCATTTAAAATAATGAACATGTCTATGGCAGTAATGAACTTTCTATGGAGTATATTATTACTGTTATTT TGTTGCATAGTTAATTTATATTATTGTAAATATGCCAAGGCCAATATTTGTTCAAGATCGTCATGCTAA
Upstream 100 bases:
>100_bases AACATTATATAGTAGTTTTTACTTAAAAAATACTGTAAACCTTATTATAATAACTGTAAATTTGAAAAAAATTACTTACA TAAACTATGATTGAATTGAA
Downstream 100 bases:
>100_bases AATAGCAGAAATGATTCGAGTAAACTACGCTGGTGAGTATGGAGCATGCAGAATTTATAAAGGACAAATAAATTTTATAA ATAATAAAACATGTAAAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MIDTILKGLILNSYRRFFIVLAIVPVVSLSFAYYVEYILEVAPCTLCTYQRWPYYMLFFLSILGISFSRLSNILHKVIIL NFVISALISGYHYGIEKEIFSEPKTCKVNTIMSENLSVKERIKLLETIPVVKSCKAVPFKIMNMSMAVMNFLWSILLLLF CCIVNLYYCKYAKANICSRSSC
Sequences:
>Translated_182_residues MIDTILKGLILNSYRRFFIVLAIVPVVSLSFAYYVEYILEVAPCTLCTYQRWPYYMLFFLSILGISFSRLSNILHKVIIL NFVISALISGYHYGIEKEIFSEPKTCKVNTIMSENLSVKERIKLLETIPVVKSCKAVPFKIMNMSMAVMNFLWSILLLLF CCIVNLYYCKYAKANICSRSSC >Mature_182_residues MIDTILKGLILNSYRRFFIVLAIVPVVSLSFAYYVEYILEVAPCTLCTYQRWPYYMLFFLSILGISFSRLSNILHKVIIL NFVISALISGYHYGIEKEIFSEPKTCKVNTIMSENLSVKERIKLLETIPVVKSCKAVPFKIMNMSMAVMNFLWSILLLLF CCIVNLYYCKYAKANICSRSSC
Specific function: Unknown
COG id: COG1495
COG function: function code O; Disulfide bond formation protein DsbB
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003752 [H]
Pfam domain/function: PF02600 DsbB [H]
EC number: NA
Molecular weight: Translated: 21000; Mature: 21000
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 8.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDTILKGLILNSYRRFFIVLAIVPVVSLSFAYYVEYILEVAPCTLCTYQRWPYYMLFFL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH SILGISFSRLSNILHKVIILNFVISALISGYHYGIEKEIFSEPKTCKVNTIMSENLSVKE HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEHHHHHCCCCHHH RIKLLETIPVVKSCKAVPFKIMNMSMAVMNFLWSILLLLFCCIVNLYYCKYAKANICSRS HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SC CC >Mature Secondary Structure MIDTILKGLILNSYRRFFIVLAIVPVVSLSFAYYVEYILEVAPCTLCTYQRWPYYMLFFL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH SILGISFSRLSNILHKVIILNFVISALISGYHYGIEKEIFSEPKTCKVNTIMSENLSVKE HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEHHHHHCCCCHHH RIKLLETIPVVKSCKAVPFKIMNMSMAVMNFLWSILLLLFCCIVNLYYCKYAKANICSRS HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SC CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]