| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184241
Identifier: 189184241
GI number: 189184241
Start: 1358960
End: 1359985
Strand: Direct
Name: 189184241
Synonym: OTT_1334
Alternate gene names: NA
Gene position: 1358960-1359985 (Clockwise)
Preceding gene: 189184239
Following gene: 189184242
Centisome position: 67.64
GC content: 31.87
Gene sequence:
>1026_bases ATGAAAAATTTTACAGATCTTATACAACACCTTTCTCATACACAGGAAGATTGTATACTTGTTAAATCTAAGGAACAATT ACCAACAAATATAGCCTACAATAGCGATAGTCATAGTCTTGGGTTGCCACAATATAATATTTGCAACCAAATTTTTATTA AATTACAAAGCTATCTGTACCAGCTTAGTCAATGCATTTGGAGCGCACCTTCTAATGAATCAAATAGCACTGTATATTCT ATGGATTGTAGCGAAGCGTTTGGATTTTCTGTCAATAATGATACTAAGATAGATATAGATGATGAAAAGTATGCTCTTAG ATTAATAAGTCCTGAAGCAAATGAATGGATTAAAAAAAACGCTTGTGAAACAATAAAAAACTGCACTTTAAATGCTTTAG ACGCTATTTCTGGTGAAATTATAGCGTACAATAAAGAAGCAGCTAATGAAAAATATGAGCCCAGTATATTGCATAATGCG CAGTATGCAATCATAGGCGCAAGCGTGGTATCTGTAGGATTAGCAATATGTGGTGCTAAGTATTGCATCACGAAATACCA AGAGTATAGGCGTAATAAGCAACAAATAGATCTTATCTCACATGTCAGCAAAGATTATGATGATAATGCTGAAAGAGAAC CTTGTATTTCTTCTGCATCAGAACGCAACATTTTTAATACTAGTAAAACTGATAGTTTTAGTGAAGCTAAAGCTTTCAAT TTAAATGCAGAACCTGGATCAGCTCATGCAATAGAATTAATAATTCACAAAAGTAGCCAAACTAATGATTTTAGCACTGC TGTAAACCTTGCATTACAAGAACTAAGATGGTCAGAAGATAATGATAATTATAACGATATTACTACTTATACTTCATTGT TTGATAATGTTATAAAGAAAGCAAAACATATTACGACTCATGCTGATATACATCATTCTGAGGTAATAAACAGCTTTGAG CTATCAACCAATGTTGTAGGAGATATAGAAGAGAATATATATGAATTACTAGATAATATTAGTTAG
Upstream 100 bases:
>100_bases TGCATATTCATTAACATTAATTTGCTAATTATAATAATACATTTTATTATTATAGCAGAAGGTTGAAGGTATATTAAATA AGTTAAGGGAAAATTATTAT
Downstream 100 bases:
>100_bases GTTACATGCAAATTTTTAACTGATTTTAACTAATTTTAACTAGCTCAAAAAAAGTTAGCTCAAGTTAAGGCTTTATTAAA AGATATAAAATCTGCAGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MKNFTDLIQHLSHTQEDCILVKSKEQLPTNIAYNSDSHSLGLPQYNICNQIFIKLQSYLYQLSQCIWSAPSNESNSTVYS MDCSEAFGFSVNNDTKIDIDDEKYALRLISPEANEWIKKNACETIKNCTLNALDAISGEIIAYNKEAANEKYEPSILHNA QYAIIGASVVSVGLAICGAKYCITKYQEYRRNKQQIDLISHVSKDYDDNAEREPCISSASERNIFNTSKTDSFSEAKAFN LNAEPGSAHAIELIIHKSSQTNDFSTAVNLALQELRWSEDNDNYNDITTYTSLFDNVIKKAKHITTHADIHHSEVINSFE LSTNVVGDIEENIYELLDNIS
Sequences:
>Translated_341_residues MKNFTDLIQHLSHTQEDCILVKSKEQLPTNIAYNSDSHSLGLPQYNICNQIFIKLQSYLYQLSQCIWSAPSNESNSTVYS MDCSEAFGFSVNNDTKIDIDDEKYALRLISPEANEWIKKNACETIKNCTLNALDAISGEIIAYNKEAANEKYEPSILHNA QYAIIGASVVSVGLAICGAKYCITKYQEYRRNKQQIDLISHVSKDYDDNAEREPCISSASERNIFNTSKTDSFSEAKAFN LNAEPGSAHAIELIIHKSSQTNDFSTAVNLALQELRWSEDNDNYNDITTYTSLFDNVIKKAKHITTHADIHHSEVINSFE LSTNVVGDIEENIYELLDNIS >Mature_341_residues MKNFTDLIQHLSHTQEDCILVKSKEQLPTNIAYNSDSHSLGLPQYNICNQIFIKLQSYLYQLSQCIWSAPSNESNSTVYS MDCSEAFGFSVNNDTKIDIDDEKYALRLISPEANEWIKKNACETIKNCTLNALDAISGEIIAYNKEAANEKYEPSILHNA QYAIIGASVVSVGLAICGAKYCITKYQEYRRNKQQIDLISHVSKDYDDNAEREPCISSASERNIFNTSKTDSFSEAKAFN LNAEPGSAHAIELIIHKSSQTNDFSTAVNLALQELRWSEDNDNYNDITTYTSLFDNVIKKAKHITTHADIHHSEVINSFE LSTNVVGDIEENIYELLDNIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38398; Mature: 38398
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNFTDLIQHLSHTQEDCILVKSKEQLPTNIAYNSDSHSLGLPQYNICNQIFIKLQSYLY CCCHHHHHHHHHCCCCCEEEEECCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHH QLSQCIWSAPSNESNSTVYSMDCSEAFGFSVNNDTKIDIDDEKYALRLISPEANEWIKKN HHHHHHHCCCCCCCCCEEEEECCHHHCCCCCCCCCEEEECCCEEEEEEECCCHHHHHHHH ACETIKNCTLNALDAISGEIIAYNKEAANEKYEPSILHNAQYAIIGASVVSVGLAICGAK HHHHHHHCCHHHHHHCCCCEEEECHHHCCCCCCCHHHCCCCCEEEHHHHHHHHHHHHHHH YCITKYQEYRRNKQQIDLISHVSKDYDDNAEREPCISSASERNIFNTSKTDSFSEAKAFN HHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHCCHHHCCCCCCCCCCCCCHHHEEE LNAEPGSAHAIELIIHKSSQTNDFSTAVNLALQELRWSEDNDNYNDITTYTSLFDNVIKK CCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH AKHITTHADIHHSEVINSFELSTNVVGDIEENIYELLDNIS HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKNFTDLIQHLSHTQEDCILVKSKEQLPTNIAYNSDSHSLGLPQYNICNQIFIKLQSYLY CCCHHHHHHHHHCCCCCEEEEECCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHH QLSQCIWSAPSNESNSTVYSMDCSEAFGFSVNNDTKIDIDDEKYALRLISPEANEWIKKN HHHHHHHCCCCCCCCCEEEEECCHHHCCCCCCCCCEEEECCCEEEEEEECCCHHHHHHHH ACETIKNCTLNALDAISGEIIAYNKEAANEKYEPSILHNAQYAIIGASVVSVGLAICGAK HHHHHHHCCHHHHHHCCCCEEEECHHHCCCCCCCHHHCCCCCEEEHHHHHHHHHHHHHHH YCITKYQEYRRNKQQIDLISHVSKDYDDNAEREPCISSASERNIFNTSKTDSFSEAKAFN HHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHCCHHHCCCCCCCCCCCCCHHHEEE LNAEPGSAHAIELIIHKSSQTNDFSTAVNLALQELRWSEDNDNYNDITTYTSLFDNVIKK CCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH AKHITTHADIHHSEVINSFELSTNVVGDIEENIYELLDNIS HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA