| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is folD [H]
Identifier: 189184230
GI number: 189184230
Start: 1343275
End: 1344180
Strand: Direct
Name: folD [H]
Synonym: OTT_1323
Alternate gene names: 189184230
Gene position: 1343275-1344180 (Clockwise)
Preceding gene: 189184229
Following gene: 189184235
Centisome position: 66.86
GC content: 30.91
Gene sequence:
>906_bases ATGACAGTAATTATGGATGGTAAAAAGCTTGCTGAGTTGAGGTTAGTAGAAACAAAAAATGACTTACTAGCTCTTAAAGA TAAATATCAAATAACAGTTAAGTTGGTAATAATTTTAGTTGGTAACAATGATGCAAGCTTGATTTATGTTAATAATAAGG TAGCTAAAGCTAAGGCTATTGGTATGGATTCAGAAATAATTAGGTTATTCGAATTCATAGAGGAAAAAAAGTTATTATCT GTTATTGATGACTTAAATTGTGATAGTACAGTACATGGTATTATTGTTCAATTGCCTCTCCCACCTCATATCGACGCTTT AAAAATATTTGCAAGAATTGATTCTAGAAAAGATGTTGATGGGCTTAACCCGATAAATATAGGGTATCTTAATATTGGAG CTAACCATGGATTAATTCCTTGTACAGCTTTAGGATGCATAGATTTATTACAGTATTATGTCACAGATTTGAAGGGTAAA CATGTAGTTGTAATAGGAAAATCCAATATTGTTGGTAAACCTCTATCAGCATTACTGTTACGTCATTCTTGTACTGTTAC TATCTGTCATTCTGCTACTGTTGATTTAGCTTTGCATACTAGAACAGCTGATATTGTAATTTCAGCTGTTGGAAAGGCGA ATTTTTTAACGAATAAGCATTTTTCAGGTAATTTAGCTTTTATTGATGTTGGAATAAGTCATATTTATGATTTGCAAACT CATAAACGAAAATTAGTTGGAGATGGAGATTTTTTAAAAATCAAAGATTTAGTAAAATTTATTACTCCAGTTCCAGGTGG GGTAGGGCCAATGACAGTAGCATATCTATTAAAAAATACATTAACTGCTGCTAAACTTATTTATGCGAGCATTATAGATA ATGATGATGAAAAACACTTGTGTTAG
Upstream 100 bases:
>100_bases GCTTTGCTGAAGCTGCAACTGCAATGAGTCATTGTTATCAAAGAGTTTTTGGAAAAAAAATGCATTTTCAATACTCTACT GTAAAGGGAGTATTACGTTC
Downstream 100 bases:
>100_bases AATAGTTATTATTTTACTATAACATGCTACATTAGTAATTATTTTTACTAAATTTAAGGTCGAATTAATATGATCAAAAT CTATTAGATTTAACAAACAA
Product: methylenetetrahydrofolate dehydrogenase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase [H]
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MTVIMDGKKLAELRLVETKNDLLALKDKYQITVKLVIILVGNNDASLIYVNNKVAKAKAIGMDSEIIRLFEFIEEKKLLS VIDDLNCDSTVHGIIVQLPLPPHIDALKIFARIDSRKDVDGLNPINIGYLNIGANHGLIPCTALGCIDLLQYYVTDLKGK HVVVIGKSNIVGKPLSALLLRHSCTVTICHSATVDLALHTRTADIVISAVGKANFLTNKHFSGNLAFIDVGISHIYDLQT HKRKLVGDGDFLKIKDLVKFITPVPGGVGPMTVAYLLKNTLTAAKLIYASIIDNDDEKHLC
Sequences:
>Translated_301_residues MTVIMDGKKLAELRLVETKNDLLALKDKYQITVKLVIILVGNNDASLIYVNNKVAKAKAIGMDSEIIRLFEFIEEKKLLS VIDDLNCDSTVHGIIVQLPLPPHIDALKIFARIDSRKDVDGLNPINIGYLNIGANHGLIPCTALGCIDLLQYYVTDLKGK HVVVIGKSNIVGKPLSALLLRHSCTVTICHSATVDLALHTRTADIVISAVGKANFLTNKHFSGNLAFIDVGISHIYDLQT HKRKLVGDGDFLKIKDLVKFITPVPGGVGPMTVAYLLKNTLTAAKLIYASIIDNDDEKHLC >Mature_300_residues TVIMDGKKLAELRLVETKNDLLALKDKYQITVKLVIILVGNNDASLIYVNNKVAKAKAIGMDSEIIRLFEFIEEKKLLSV IDDLNCDSTVHGIIVQLPLPPHIDALKIFARIDSRKDVDGLNPINIGYLNIGANHGLIPCTALGCIDLLQYYVTDLKGKH VVVIGKSNIVGKPLSALLLRHSCTVTICHSATVDLALHTRTADIVISAVGKANFLTNKHFSGNLAFIDVGISHIYDLQTH KRKLVGDGDFLKIKDLVKFITPVPGGVGPMTVAYLLKNTLTAAKLIYASIIDNDDEKHLC
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate [H]
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family [H]
Homologues:
Organism=Homo sapiens, GI222418558, Length=265, Percent_Identity=47.5471698113208, Blast_Score=199, Evalue=2e-51, Organism=Homo sapiens, GI222136639, Length=287, Percent_Identity=39.7212543554007, Blast_Score=196, Evalue=2e-50, Organism=Homo sapiens, GI94721354, Length=298, Percent_Identity=41.2751677852349, Blast_Score=183, Evalue=1e-46, Organism=Escherichia coli, GI1786741, Length=280, Percent_Identity=43.2142857142857, Blast_Score=199, Evalue=2e-52, Organism=Caenorhabditis elegans, GI17568735, Length=269, Percent_Identity=44.2379182156134, Blast_Score=192, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6319558, Length=288, Percent_Identity=41.3194444444444, Blast_Score=200, Evalue=3e-52, Organism=Saccharomyces cerevisiae, GI6321643, Length=293, Percent_Identity=40.9556313993174, Blast_Score=194, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6322933, Length=198, Percent_Identity=28.2828282828283, Blast_Score=63, Evalue=7e-11, Organism=Drosophila melanogaster, GI17136818, Length=299, Percent_Identity=41.1371237458194, Blast_Score=199, Evalue=2e-51, Organism=Drosophila melanogaster, GI17136816, Length=299, Percent_Identity=41.1371237458194, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI24645718, Length=285, Percent_Identity=39.6491228070175, Blast_Score=190, Evalue=1e-48, Organism=Drosophila melanogaster, GI17137370, Length=285, Percent_Identity=39.6491228070175, Blast_Score=190, Evalue=1e-48, Organism=Drosophila melanogaster, GI62472483, Length=285, Percent_Identity=39.6491228070175, Blast_Score=186, Evalue=1e-47, Organism=Drosophila melanogaster, GI45551871, Length=285, Percent_Identity=39.6491228070175, Blast_Score=186, Evalue=1e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020867 - InterPro: IPR020631 [H]
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C [H]
EC number: =1.5.1.5; =3.5.4.9 [H]
Molecular weight: Translated: 32908; Mature: 32777
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: PS00766 THF_DHG_CYH_1 ; PS00767 THF_DHG_CYH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVIMDGKKLAELRLVETKNDLLALKDKYQITVKLVIILVGNNDASLIYVNNKVAKAKAI CEEEECCCCEEEEEEEECCCCEEEECCCEEEEEEEEEEEECCCCEEEEEEECCEEEHHHC GMDSEIIRLFEFIEEKKLLSVIDDLNCDSTVHGIIVQLPLPPHIDALKIFARIDSRKDVD CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCC GLNPINIGYLNIGANHGLIPCTALGCIDLLQYYVTDLKGKHVVVIGKSNIVGKPLSALLL CCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHH RHSCTVTICHSATVDLALHTRTADIVISAVGKANFLTNKHFSGNLAFIDVGISHIYDLQT HCCCEEEEEECCEEEEEEEECCCEEEEEECCCCCEEECCCCCCCEEEEEECHHHHHHHHH HKRKLVGDGDFLKIKDLVKFITPVPGGVGPMTVAYLLKNTLTAAKLIYASIIDNDDEKHL HHHHHCCCCCEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC C C >Mature Secondary Structure TVIMDGKKLAELRLVETKNDLLALKDKYQITVKLVIILVGNNDASLIYVNNKVAKAKAI EEEECCCCEEEEEEEECCCCEEEECCCEEEEEEEEEEEECCCCEEEEEEECCEEEHHHC GMDSEIIRLFEFIEEKKLLSVIDDLNCDSTVHGIIVQLPLPPHIDALKIFARIDSRKDVD CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCC GLNPINIGYLNIGANHGLIPCTALGCIDLLQYYVTDLKGKHVVVIGKSNIVGKPLSALLL CCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHH RHSCTVTICHSATVDLALHTRTADIVISAVGKANFLTNKHFSGNLAFIDVGISHIYDLQT HCCCEEEEEECCEEEEEEEECCCEEEEEECCCCCEEECCCCCCCEEEEEECHHHHHHHHH HKRKLVGDGDFLKIKDLVKFITPVPGGVGPMTVAYLLKNTLTAAKLIYASIIDNDDEKHL HHHHHCCCCCEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC C C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA