| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184221
Identifier: 189184221
GI number: 189184221
Start: 1332255
End: 1332608
Strand: Direct
Name: 189184221
Synonym: OTT_1314
Alternate gene names: NA
Gene position: 1332255-1332608 (Clockwise)
Preceding gene: 189184220
Following gene: 189184222
Centisome position: 66.31
GC content: 29.66
Gene sequence:
>354_bases ATGCCAAAATCATATAGCCAAGACTTTCTGGAGGAAGTAATAAAATGTGTTAATCAAGGAAAAAGTTGTAATGCTGCCTC AGTAAAATTTGATATAGCAGCAAACACAGTAAGAAATTGGTATAAAAGATATAAATCAGAAGGTCATTATAAAGAAAGAG ATCGTCTTGGTAAAAAAGGGAAAATATATAAGATAGAATTTGAAAAATACATTTCGCTAAATCAAAATCTAACTCTGGCA CAAGTAGGAAAACATTTTGGAATTTCAATAAGGGTAGCGAGTTATTATATGAAAAAATTCGGCTATAGTTATAAAAAAAA CCGTTTACCTACATGGAAGCAAAACCAGAAATAA
Upstream 100 bases:
>100_bases ACTAATGCTATCAGATTTGATAGCAAAAGAAGCAAAGTTGGAGTCCAGATAACGTATAGTCATTTACAATGAAGTTTGAG CATAGTATTCTGAAAAGAGA
Downstream 100 bases:
>100_bases GAGAAAAATATCAACAAGTGATAAGTGCTATACCTAAGGAAAACTTGGTATACATAGATGAAAGTGGCATTGAAATGTCT ATATGCAAGAATAGAGTGTG
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MPKSYSQDFLEEVIKCVNQGKSCNAASVKFDIAANTVRNWYKRYKSEGHYKERDRLGKKGKIYKIEFEKYISLNQNLTLA QVGKHFGISIRVASYYMKKFGYSYKKNRLPTWKQNQK
Sequences:
>Translated_117_residues MPKSYSQDFLEEVIKCVNQGKSCNAASVKFDIAANTVRNWYKRYKSEGHYKERDRLGKKGKIYKIEFEKYISLNQNLTLA QVGKHFGISIRVASYYMKKFGYSYKKNRLPTWKQNQK >Mature_116_residues PKSYSQDFLEEVIKCVNQGKSCNAASVKFDIAANTVRNWYKRYKSEGHYKERDRLGKKGKIYKIEFEKYISLNQNLTLAQ VGKHFGISIRVASYYMKKFGYSYKKNRLPTWKQNQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13848; Mature: 13717
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKSYSQDFLEEVIKCVNQGKSCNAASVKFDIAANTVRNWYKRYKSEGHYKERDRLGKKG CCCCCHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHHCCCCC KIYKIEFEKYISLNQNLTLAQVGKHFGISIRVASYYMKKFGYSYKKNRLPTWKQNQK CEEEEEHHHHHCCCCCCHHHHHHHHCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure PKSYSQDFLEEVIKCVNQGKSCNAASVKFDIAANTVRNWYKRYKSEGHYKERDRLGKKG CCCCHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHHCCCCC KIYKIEFEKYISLNQNLTLAQVGKHFGISIRVASYYMKKFGYSYKKNRLPTWKQNQK CEEEEEHHHHHCCCCCCHHHHHHHHCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA