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The map label for this gene is ybbK [C]

Identifier: 189184220

GI number: 189184220

Start: 1330341

End: 1331300

Strand: Direct

Name: ybbK [C]

Synonym: OTT_1313

Alternate gene names: 189184220

Gene position: 1330341-1331300 (Clockwise)

Preceding gene: 189184217

Following gene: 189184221

Centisome position: 66.22

GC content: 34.38

Gene sequence:

>960_bases
ATGATATTAAGTATAAATATAATAAATATATTCGTGTTAGTTGTACTAGGTATTATACTATTTAATGTATTTAAAATCGT
ACCTCAGCAACAAGCTTGGATAATCGAAAGATTAGGTAAGTTACATAAAGTTTTGCCTGCAGGGTTAAATTTTATAATCC
CAATGGTAGATAGAGTAGCATACAAGCATACCTTAAAGGAGCAAGCAATTGATGTAACTGCACAAACAGCTATTTCTAAC
GATAATGTTAGCTTATCTATTGATGGCGTACTATATGTTAAAATTATAGATCCTATAGCAGCTTCTTATGGAGTTAGTGA
CCCATATTATGCGATTACTCAATTAGCTCAAACAACTATGCGATCAGAGATAGGAAAGATTCCACTAGATAAAACTTTTG
AGGAACGGGAAAATTTAAATATAGCTATTGTAACATCTATTAATCATGCAGCTGCAAACTGGGGAATTCAGTGTATGAGA
TATGAGATTAAGGATATTTACCCTCCACAATCTGTATTACGAGCTATGGAACTTCAGGTAGCAGCAGAAAGACAAAAACG
TGCTCAAATACTTGAATCAGAGGGAAAGAGGCAGTCGCAAATCAACATAGCAGAAGCAGGAAAAGCAGAAGTTGTTTTAA
ATTCTGAAGCTGCAAAAATCGATCAAGTTAATAGAGCTGTAGGTGAAGCTGAAGCTATATTGCTAGTTGCGAAAGCTACA
GCTGAAGGAATAGAGCAACTAGCACAAGCAATAAACAATACAGGAGGAAGTGACGCTGTCTCGCTACGTATTGCAGAACA
GTATATTGATGCTTTATCCAAAATAGCTAAAGAAACTAATACAGTAATTATACCATCAAACATTAATGACAGTAGTTCAG
TAGTTACTCAGGCTTTATCAATTTTTGATGCAATAAAACTTTCGAAGTCTAAAAAATCTACAAACTCAGAGAACGCATAG

Upstream 100 bases:

>100_bases
GCTTATGCAATAACTATATGATATGGAATTGTATATTCTTGACCATATATTATATATTAAAGTATAATAGCGAATTAATT
AATTTTGGAAAATAAAAATT

Downstream 100 bases:

>100_bases
CATAAGTTACATATGTAAAAAGTTTATTGATAGAACAGAAGTAAGCTATGGTAAGGCTGCAATTAATCTAGTAATATATT
AGACTAAGAGATGTTATAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MILSINIINIFVLVVLGIILFNVFKIVPQQQAWIIERLGKLHKVLPAGLNFIIPMVDRVAYKHTLKEQAIDVTAQTAISN
DNVSLSIDGVLYVKIIDPIAASYGVSDPYYAITQLAQTTMRSEIGKIPLDKTFEERENLNIAIVTSINHAAANWGIQCMR
YEIKDIYPPQSVLRAMELQVAAERQKRAQILESEGKRQSQINIAEAGKAEVVLNSEAAKIDQVNRAVGEAEAILLVAKAT
AEGIEQLAQAINNTGGSDAVSLRIAEQYIDALSKIAKETNTVIIPSNINDSSSVVTQALSIFDAIKLSKSKKSTNSENA

Sequences:

>Translated_319_residues
MILSINIINIFVLVVLGIILFNVFKIVPQQQAWIIERLGKLHKVLPAGLNFIIPMVDRVAYKHTLKEQAIDVTAQTAISN
DNVSLSIDGVLYVKIIDPIAASYGVSDPYYAITQLAQTTMRSEIGKIPLDKTFEERENLNIAIVTSINHAAANWGIQCMR
YEIKDIYPPQSVLRAMELQVAAERQKRAQILESEGKRQSQINIAEAGKAEVVLNSEAAKIDQVNRAVGEAEAILLVAKAT
AEGIEQLAQAINNTGGSDAVSLRIAEQYIDALSKIAKETNTVIIPSNINDSSSVVTQALSIFDAIKLSKSKKSTNSENA
>Mature_319_residues
MILSINIINIFVLVVLGIILFNVFKIVPQQQAWIIERLGKLHKVLPAGLNFIIPMVDRVAYKHTLKEQAIDVTAQTAISN
DNVSLSIDGVLYVKIIDPIAASYGVSDPYYAITQLAQTTMRSEIGKIPLDKTFEERENLNIAIVTSINHAAANWGIQCMR
YEIKDIYPPQSVLRAMELQVAAERQKRAQILESEGKRQSQINIAEAGKAEVVLNSEAAKIDQVNRAVGEAEAILLVAKAT
AEGIEQLAQAINNTGGSDAVSLRIAEQYIDALSKIAKETNTVIIPSNINDSSSVVTQALSIFDAIKLSKSKKSTNSENA

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI7305503, Length=289, Percent_Identity=54.6712802768166, Blast_Score=319, Evalue=2e-87,
Organism=Homo sapiens, GI21686995, Length=189, Percent_Identity=30.6878306878307, Blast_Score=89, Evalue=7e-18,
Organism=Homo sapiens, GI221316744, Length=189, Percent_Identity=30.6878306878307, Blast_Score=89, Evalue=8e-18,
Organism=Homo sapiens, GI38016911, Length=211, Percent_Identity=29.3838862559242, Blast_Score=79, Evalue=4e-15,
Organism=Escherichia coli, GI1786697, Length=307, Percent_Identity=34.2019543973941, Blast_Score=179, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI32564147, Length=293, Percent_Identity=52.2184300341297, Blast_Score=322, Evalue=2e-88,
Organism=Caenorhabditis elegans, GI17569493, Length=196, Percent_Identity=31.1224489795918, Blast_Score=107, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI193209764, Length=196, Percent_Identity=31.1224489795918, Blast_Score=106, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17569497, Length=200, Percent_Identity=28.5, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17570161, Length=200, Percent_Identity=31.5, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI193210507, Length=200, Percent_Identity=31.5, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI71989955, Length=160, Percent_Identity=31.25, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI71989948, Length=160, Percent_Identity=31.25, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17569499, Length=217, Percent_Identity=30.8755760368664, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI71987612, Length=214, Percent_Identity=29.4392523364486, Blast_Score=81, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI25153583, Length=214, Percent_Identity=29.4392523364486, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI32566490, Length=211, Percent_Identity=28.9099526066351, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71987621, Length=214, Percent_Identity=29.4392523364486, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17570459, Length=212, Percent_Identity=26.8867924528302, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI71989963, Length=120, Percent_Identity=32.5, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI45550506, Length=291, Percent_Identity=53.6082474226804, Blast_Score=315, Evalue=2e-86,
Organism=Drosophila melanogaster, GI28573263, Length=200, Percent_Identity=30, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI45556022, Length=216, Percent_Identity=30.5555555555556, Blast_Score=93, Evalue=3e-19,
Organism=Drosophila melanogaster, GI62484448, Length=210, Percent_Identity=30.952380952381, Blast_Score=91, Evalue=7e-19,
Organism=Drosophila melanogaster, GI62484274, Length=210, Percent_Identity=30.952380952381, Blast_Score=91, Evalue=9e-19,
Organism=Drosophila melanogaster, GI281365664, Length=210, Percent_Identity=30.952380952381, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI281361631, Length=205, Percent_Identity=27.8048780487805, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI281361633, Length=205, Percent_Identity=27.8048780487805, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24657857, Length=210, Percent_Identity=30.952380952381, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI18860517, Length=204, Percent_Identity=31.3725490196078, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI21356845, Length=198, Percent_Identity=26.2626262626263, Blast_Score=87, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 34838; Mature: 34838

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILSINIINIFVLVVLGIILFNVFKIVPQQQAWIIERLGKLHKVLPAGLNFIIPMVDRVA
CEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YKHTLKEQAIDVTAQTAISNDNVSLSIDGVLYVKIIDPIAASYGVSDPYYAITQLAQTTM
HHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEEEHHHHHHHCCCCCHHHHHHHHHHHHH
RSEIGKIPLDKTFEERENLNIAIVTSINHAAANWGIQCMRYEIKDIYPPQSVLRAMELQV
HHHHCCCCCCCCHHHHCCCCEEEEEECCHHHHHCCHHHHEEHHHHCCCHHHHHHHHHHHH
AAERQKRAQILESEGKRQSQINIAEAGKAEVVLNSEAAKIDQVNRAVGEAEAILLVAKAT
HHHHHHHHHHHHHCCCHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHCCHHEEEEEEHHH
AEGIEQLAQAINNTGGSDAVSLRIAEQYIDALSKIAKETNTVIIPSNINDSSSVVTQALS
HHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHH
IFDAIKLSKSKKSTNSENA
HHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MILSINIINIFVLVVLGIILFNVFKIVPQQQAWIIERLGKLHKVLPAGLNFIIPMVDRVA
CEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YKHTLKEQAIDVTAQTAISNDNVSLSIDGVLYVKIIDPIAASYGVSDPYYAITQLAQTTM
HHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEEEHHHHHHHCCCCCHHHHHHHHHHHHH
RSEIGKIPLDKTFEERENLNIAIVTSINHAAANWGIQCMRYEIKDIYPPQSVLRAMELQV
HHHHCCCCCCCCHHHHCCCCEEEEEECCHHHHHCCHHHHEEHHHHCCCHHHHHHHHHHHH
AAERQKRAQILESEGKRQSQINIAEAGKAEVVLNSEAAKIDQVNRAVGEAEAILLVAKAT
HHHHHHHHHHHHHCCCHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHCCHHEEEEEEHHH
AEGIEQLAQAINNTGGSDAVSLRIAEQYIDALSKIAKETNTVIIPSNINDSSSVVTQALS
HHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHH
IFDAIKLSKSKKSTNSENA
HHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]