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The map label for this gene is traN [H]

Identifier: 189184212

GI number: 189184212

Start: 1322915

End: 1323619

Strand: Direct

Name: traN [H]

Synonym: OTT_1305

Alternate gene names: 189184212

Gene position: 1322915-1323619 (Clockwise)

Preceding gene: 189184211

Following gene: 189184214

Centisome position: 65.85

GC content: 34.18

Gene sequence:

>705_bases
ATGAAAAAAAATGAAATATGTATACTTGAATATGACTACAGAGATAAGACTCAAGAACTAAGGGAAGTAGCAGAATATTG
GAAAGTTTTAAACCCTGAACTTGAGCAATTAACAGAAAGTAACGAATGCTATGAGGTCAATAGAATCAACTATGATGGTG
GTGATAGAGTATTTTTTGACAAGTTTAAAGTCAATCGTCCATATTGGAAACAAAAGATTGTTTTTTCTTGTACTAGCGAT
CCAAAAGATGGTTGCAAACACCTTAAAATTCAAAATTGCGAATTAAAAAATAGCACTTGCCAAAAATCAGTAGCAAATAT
TTGTTTACTCTGGCAGCACGATTATAGCTGTTCAACTGAGAAGCAAACAATGCTACACTCATCATTGCGTAATAACTCAA
TCTTCTGTTTAGGAGGCAATTGCAATACTCCGACTATTATACCAAACAGTGATATAGCTAAAGTAGCTCATCTAGCAATG
CTAAATCAGATGAGCAAGGACATTAAAACAAATCCTGTTTCTGTATTTTCAGGTAAACATCGCAAATGCAAAAAGGACGT
ATTTAGTTTTTTGAATTGCTGCTCTTCAATGACTGGCTGGGGGCGTGATATAGGCTTATCACAATGCAAATCTAAAGAAC
AAGAATTAGCTCTATATAGAAAAAAAGGTTACTGTGTGAGTAGACCTAACCAATCGCTCAATTAG

Upstream 100 bases:

>100_bases
CTAGTAGATGATCCCGAAGCAATTGAAAGACAAATGAAATGGGCTATTGTTAATAGGCTCGGTGTACCTACACAGCATAT
TGGTAGAAATTTTTTATTAC

Downstream 100 bases:

>100_bases
GCCCCTCCTCAGAACCGGACTTGCAGAATTACCGCATTCTGGCTCTCAAAAATAAGATAAGCATTATGCCTTATTTGTTG
TCTAGAACATTGAGACAATC

Product: putative conjugative transfer protein TraN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MKKNEICILEYDYRDKTQELREVAEYWKVLNPELEQLTESNECYEVNRINYDGGDRVFFDKFKVNRPYWKQKIVFSCTSD
PKDGCKHLKIQNCELKNSTCQKSVANICLLWQHDYSCSTEKQTMLHSSLRNNSIFCLGGNCNTPTIIPNSDIAKVAHLAM
LNQMSKDIKTNPVSVFSGKHRKCKKDVFSFLNCCSSMTGWGRDIGLSQCKSKEQELALYRKKGYCVSRPNQSLN

Sequences:

>Translated_234_residues
MKKNEICILEYDYRDKTQELREVAEYWKVLNPELEQLTESNECYEVNRINYDGGDRVFFDKFKVNRPYWKQKIVFSCTSD
PKDGCKHLKIQNCELKNSTCQKSVANICLLWQHDYSCSTEKQTMLHSSLRNNSIFCLGGNCNTPTIIPNSDIAKVAHLAM
LNQMSKDIKTNPVSVFSGKHRKCKKDVFSFLNCCSSMTGWGRDIGLSQCKSKEQELALYRKKGYCVSRPNQSLN
>Mature_234_residues
MKKNEICILEYDYRDKTQELREVAEYWKVLNPELEQLTESNECYEVNRINYDGGDRVFFDKFKVNRPYWKQKIVFSCTSD
PKDGCKHLKIQNCELKNSTCQKSVANICLLWQHDYSCSTEKQTMLHSSLRNNSIFCLGGNCNTPTIIPNSDIAKVAHLAM
LNQMSKDIKTNPVSVFSGKHRKCKKDVFSFLNCCSSMTGWGRDIGLSQCKSKEQELALYRKKGYCVSRPNQSLN

Specific function: Essential for F plasmid conjugative transfer. May interact with the recipient cell surface to stabilize mating pairs initiated by F-pili. May interact with traG [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009726
- InterPro:   IPR014121 [H]

Pfam domain/function: PF06986 TraN [H]

EC number: NA

Molecular weight: Translated: 27044; Mature: 27044

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
6.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNEICILEYDYRDKTQELREVAEYWKVLNPELEQLTESNECYEVNRINYDGGDRVFFD
CCCCCEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEECCCCCCEEEEE
KFKVNRPYWKQKIVFSCTSDPKDGCKHLKIQNCELKNSTCQKSVANICLLWQHDYSCSTE
EEECCCCHHHCEEEEEECCCCHHHHHHCEEECCCCCCHHHHHHHHHEEEEEECCCCCCCH
KQTMLHSSLRNNSIFCLGGNCNTPTIIPNSDIAKVAHLAMLNQMSKDIKTNPVSVFSGKH
HHHHHHHHHCCCCEEEECCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
RKCKKDVFSFLNCCSSMTGWGRDIGLSQCKSKEQELALYRKKGYCVSRPNQSLN
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCHHHHHHHHHHCCCEECCCCCCCC
>Mature Secondary Structure
MKKNEICILEYDYRDKTQELREVAEYWKVLNPELEQLTESNECYEVNRINYDGGDRVFFD
CCCCCEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEECCCCCCEEEEE
KFKVNRPYWKQKIVFSCTSDPKDGCKHLKIQNCELKNSTCQKSVANICLLWQHDYSCSTE
EEECCCCHHHCEEEEEECCCCHHHHHHCEEECCCCCCHHHHHHHHHEEEEEECCCCCCCH
KQTMLHSSLRNNSIFCLGGNCNTPTIIPNSDIAKVAHLAMLNQMSKDIKTNPVSVFSGKH
HHHHHHHHHCCCCEEEECCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
RKCKKDVFSFLNCCSSMTGWGRDIGLSQCKSKEQELALYRKKGYCVSRPNQSLN
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCHHHHHHHHHHCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1593622; 7915817; 2050638 [H]