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The map label for this gene is traC [H]

Identifier: 189184210

GI number: 189184210

Start: 1321388

End: 1322383

Strand: Direct

Name: traC [H]

Synonym: OTT_1303

Alternate gene names: 189184210

Gene position: 1321388-1322383 (Clockwise)

Preceding gene: 189184209

Following gene: 189184211

Centisome position: 65.77

GC content: 35.54

Gene sequence:

>996_bases
TTGATTCTAGGCGGAAGCTACATAGAATTTGACATGAAAAATCCTGTATCAATTAATCCATTTTCAGAGGTGCCAGAGAA
TGATAGTGCAAAGTCTATAGAGGCTAGATCAGATTTTTTATCTAACTTTCCATTTATTTTAGCAACTATGGCTGCTCCAC
AGTATGGAACAAGCGATTTGCAACAACCAATGCTACAGAGAGCTTTGATATCAGTCTGGCAAAAAAAGGGAGCTAAAGCT
GAAATTACCGATATTGCAGACTGGTTATCAAATAGAGAAGAATCATATGCTAAAGAGCTTGGAAATATGCTCTTTCCTTT
TACTAAAGATGGGCAACATGGAAGATTTTTTAGTGGTAAGGCGCAATTATCCTTGAATTCAGACATAGTAGTGATTGAAA
CAGATCATTTAAGGTCTGTACCAGAGCTGTTAGCTATGATAGTTCAGATTATGATTGTTCATATTAATCAAACAATGGTT
AAAGGAGATAGAAGTAGACCATTTTTAATTATGATAGATGAAGCCTGGAAACTGTTAGCTGGAAAGCGTTCAGGAGAGTT
TATTGAAGAAGCTGGAAGAATAGCTCGAAAATATAATGGATCGATTGCTTTAGCTACTCAGCAACTCACGGATTACTTTC
GTCAAGAGGGTTCTGCATCTGAAAAAGCATTTGAGAACTCATCACATAAGATAATTTTGAAGCAAAATTCTGAATCATTT
AAGGCAATGCGAGCTAAACCTAAGCTTGCAGGCTTTGTTGATGAAGATTGGAAGCTGAATTTGCTGCAATCTGTACATTC
AAATCCTCCATATTATAGTGAAATAGCTATTTACAGCCCTAATGTTTCAGGTGTTGTAGGCAGATTAATGATTGATCCAT
TTACTCTACTGTTAACTTCGACGAATGCTAGAGATTATCAAGCAATAGAAGATTACATGGCTAAAGGTATGAATGTTAGT
GAGACAATTAATTATGTGATATTGGAAGATTTGTAA

Upstream 100 bases:

>100_bases
CTGGAAAATCTATTTTATGCAAGAATTAATGCTATCGGTTCTAGGAGTTGGTGGGAAAGTTTTTGTTCTTGATTACTGAA
GATCATTTAAGCGTACATGT

Downstream 100 bases:

>100_bases
ATCCTAATAATGATGAGGATTTAACCTATCATGGCCGTAATCAGCTTAGTACAGAAAGTGGAACAATGTTATTTCAAGCT
GAAAACAGTAAAAACAATGC

Product: putative conjugative transfer protein TraC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MILGGSYIEFDMKNPVSINPFSEVPENDSAKSIEARSDFLSNFPFILATMAAPQYGTSDLQQPMLQRALISVWQKKGAKA
EITDIADWLSNREESYAKELGNMLFPFTKDGQHGRFFSGKAQLSLNSDIVVIETDHLRSVPELLAMIVQIMIVHINQTMV
KGDRSRPFLIMIDEAWKLLAGKRSGEFIEEAGRIARKYNGSIALATQQLTDYFRQEGSASEKAFENSSHKIILKQNSESF
KAMRAKPKLAGFVDEDWKLNLLQSVHSNPPYYSEIAIYSPNVSGVVGRLMIDPFTLLLTSTNARDYQAIEDYMAKGMNVS
ETINYVILEDL

Sequences:

>Translated_331_residues
MILGGSYIEFDMKNPVSINPFSEVPENDSAKSIEARSDFLSNFPFILATMAAPQYGTSDLQQPMLQRALISVWQKKGAKA
EITDIADWLSNREESYAKELGNMLFPFTKDGQHGRFFSGKAQLSLNSDIVVIETDHLRSVPELLAMIVQIMIVHINQTMV
KGDRSRPFLIMIDEAWKLLAGKRSGEFIEEAGRIARKYNGSIALATQQLTDYFRQEGSASEKAFENSSHKIILKQNSESF
KAMRAKPKLAGFVDEDWKLNLLQSVHSNPPYYSEIAIYSPNVSGVVGRLMIDPFTLLLTSTNARDYQAIEDYMAKGMNVS
ETINYVILEDL
>Mature_331_residues
MILGGSYIEFDMKNPVSINPFSEVPENDSAKSIEARSDFLSNFPFILATMAAPQYGTSDLQQPMLQRALISVWQKKGAKA
EITDIADWLSNREESYAKELGNMLFPFTKDGQHGRFFSGKAQLSLNSDIVVIETDHLRSVPELLAMIVQIMIVHINQTMV
KGDRSRPFLIMIDEAWKLLAGKRSGEFIEEAGRIARKYNGSIALATQQLTDYFRQEGSASEKAFENSSHKIILKQNSESF
KAMRAKPKLAGFVDEDWKLNLLQSVHSNPPYYSEIAIYSPNVSGVVGRLMIDPFTLLLTSTNARDYQAIEDYMAKGMNVS
ETINYVILEDL

Specific function: Required for the assembly of mature F-pilin subunits into extended F pili [H]

COG id: COG3451

COG function: function code U; Type IV secretory pathway, VirB4 components

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002789
- InterPro:   IPR014117 [H]

Pfam domain/function: PF01935 DUF87 [H]

EC number: NA

Molecular weight: Translated: 37212; Mature: 37212

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILGGSYIEFDMKNPVSINPFSEVPENDSAKSIEARSDFLSNFPFILATMAAPQYGTSDL
CEECCCEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCHHHH
QQPMLQRALISVWQKKGAKAEITDIADWLSNREESYAKELGNMLFPFTKDGQHGRFFSGK
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCEECCE
AQLSLNSDIVVIETDHLRSVPELLAMIVQIMIVHINQTMVKGDRSRPFLIMIDEAWKLLA
EEEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHH
GKRSGEFIEEAGRIARKYNGSIALATQQLTDYFRQEGSASEKAFENSSHKIILKQNSESF
CCCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCCHHHHHCCCCCEEEEECCCHHH
KAMRAKPKLAGFVDEDWKLNLLQSVHSNPPYYSEIAIYSPNVSGVVGRLMIDPFTLLLTS
HHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCCEEEEEEC
TNARDYQAIEDYMAKGMNVSETINYVILEDL
CCCCHHHHHHHHHHCCCCHHHHEEEEEEECC
>Mature Secondary Structure
MILGGSYIEFDMKNPVSINPFSEVPENDSAKSIEARSDFLSNFPFILATMAAPQYGTSDL
CEECCCEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCHHHH
QQPMLQRALISVWQKKGAKAEITDIADWLSNREESYAKELGNMLFPFTKDGQHGRFFSGK
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCEECCE
AQLSLNSDIVVIETDHLRSVPELLAMIVQIMIVHINQTMVKGDRSRPFLIMIDEAWKLLA
EEEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHH
GKRSGEFIEEAGRIARKYNGSIALATQQLTDYFRQEGSASEKAFENSSHKIILKQNSESF
CCCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCCHHHHHCCCCCEEEEECCCHHH
KAMRAKPKLAGFVDEDWKLNLLQSVHSNPPYYSEIAIYSPNVSGVVGRLMIDPFTLLLTS
HHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCCEEEEEEC
TNARDYQAIEDYMAKGMNVSETINYVILEDL
CCCCHHHHHHHHHHCCCCHHHHEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2265751; 7915817; 1355084 [H]