Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184204

Identifier: 189184204

GI number: 189184204

Start: 1315420

End: 1315962

Strand: Reverse

Name: 189184204

Synonym: OTT_1297

Alternate gene names: NA

Gene position: 1315962-1315420 (Counterclockwise)

Preceding gene: 189184205

Following gene: 189184199

Centisome position: 65.5

GC content: 31.31

Gene sequence:

>543_bases
ATGAGAAAAAGTACATTAATTTTATTAACTTTATCAAATATTTTTACTTGGCAAATTTGTGCTACAGAGCTTCAATTAGA
GCCAAAAGAGGTTAGTTCTAGCTGTTGCTTAGTACATCACAATAGCCAACATTCTGACCAAGACAATACATCACTATCTA
ATAATAACGAATTTAGCAATACCGCAGTTCAATTCCTAAATGCATGGGCAAGACCAGCAGAGAAAGGTAAAAATACTGCT
GTTTACTTAACAATTAACAATCAATCTCTTAGTAATCTTGAAATTATAGGCGTTTCTGCTCCTAATATAGCTAATGCAGC
TATGTTCCATCAATCCATAAGAGATAATAATGGAGTTATTAGTATGAGCCATATTGAGCATTTATTAATTCCTCTACAAA
CTACATTTAAATTAAAACCTGGAGGTTTCCATATTATGCTAACTGGAGTTACAAAACAATTAACAGTTGGTGATTCATTC
GATCTGACTTTTTGTATGAAAGATCAAAGTACTAAAACAATTAAAGTTCAGGTTAAGAAATAG

Upstream 100 bases:

>100_bases
ATAATAAATATAAATAATTATACTTTGTATTCATTTTATCTTTTATACATAAAGAAATACAGTTATTATATATACTATTT
TTTACAAATTGGAAAGATAT

Downstream 100 bases:

>100_bases
AGTTTAATAATGTCAGATTATGATAAGAAAAAGATGAAAGGCATAGAATAAAAGGTATAGGAAGAGAAAATGTTGAGTTA
TAAAGAAAAATTTAAATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MRKSTLILLTLSNIFTWQICATELQLEPKEVSSSCCLVHHNSQHSDQDNTSLSNNNEFSNTAVQFLNAWARPAEKGKNTA
VYLTINNQSLSNLEIIGVSAPNIANAAMFHQSIRDNNGVISMSHIEHLLIPLQTTFKLKPGGFHIMLTGVTKQLTVGDSF
DLTFCMKDQSTKTIKVQVKK

Sequences:

>Translated_180_residues
MRKSTLILLTLSNIFTWQICATELQLEPKEVSSSCCLVHHNSQHSDQDNTSLSNNNEFSNTAVQFLNAWARPAEKGKNTA
VYLTINNQSLSNLEIIGVSAPNIANAAMFHQSIRDNNGVISMSHIEHLLIPLQTTFKLKPGGFHIMLTGVTKQLTVGDSF
DLTFCMKDQSTKTIKVQVKK
>Mature_180_residues
MRKSTLILLTLSNIFTWQICATELQLEPKEVSSSCCLVHHNSQHSDQDNTSLSNNNEFSNTAVQFLNAWARPAEKGKNTA
VYLTINNQSLSNLEIIGVSAPNIANAAMFHQSIRDNNGVISMSHIEHLLIPLQTTFKLKPGGFHIMLTGVTKQLTVGDSF
DLTFCMKDQSTKTIKVQVKK

Specific function: Unknown

COG id: COG2847

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007410 [H]

Pfam domain/function: PF04314 DUF461 [H]

EC number: NA

Molecular weight: Translated: 19989; Mature: 19989

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKSTLILLTLSNIFTWQICATELQLEPKEVSSSCCLVHHNSQHSDQDNTSLSNNNEFSN
CCCCEEEEEEECCEEEEEEEEEEEEECHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHH
TAVQFLNAWARPAEKGKNTAVYLTINNQSLSNLEIIGVSAPNIANAAMFHQSIRDNNGVI
HHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEE
SMSHIEHLLIPLQTTFKLKPGGFHIMLTGVTKQLTVGDSFDLTFCMKDQSTKTIKVQVKK
EHHHHHEEEEECEEEEEECCCCEEEEEECCEEEEEECCCCCEEEEECCCCCEEEEEEEEC
>Mature Secondary Structure
MRKSTLILLTLSNIFTWQICATELQLEPKEVSSSCCLVHHNSQHSDQDNTSLSNNNEFSN
CCCCEEEEEEECCEEEEEEEEEEEEECHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHH
TAVQFLNAWARPAEKGKNTAVYLTINNQSLSNLEIIGVSAPNIANAAMFHQSIRDNNGVI
HHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEE
SMSHIEHLLIPLQTTFKLKPGGFHIMLTGVTKQLTVGDSFDLTFCMKDQSTKTIKVQVKK
EHHHHHEEEEECEEEEEECCCCEEEEEECCEEEEEECCCCCEEEEECCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]