| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184204
Identifier: 189184204
GI number: 189184204
Start: 1315420
End: 1315962
Strand: Reverse
Name: 189184204
Synonym: OTT_1297
Alternate gene names: NA
Gene position: 1315962-1315420 (Counterclockwise)
Preceding gene: 189184205
Following gene: 189184199
Centisome position: 65.5
GC content: 31.31
Gene sequence:
>543_bases ATGAGAAAAAGTACATTAATTTTATTAACTTTATCAAATATTTTTACTTGGCAAATTTGTGCTACAGAGCTTCAATTAGA GCCAAAAGAGGTTAGTTCTAGCTGTTGCTTAGTACATCACAATAGCCAACATTCTGACCAAGACAATACATCACTATCTA ATAATAACGAATTTAGCAATACCGCAGTTCAATTCCTAAATGCATGGGCAAGACCAGCAGAGAAAGGTAAAAATACTGCT GTTTACTTAACAATTAACAATCAATCTCTTAGTAATCTTGAAATTATAGGCGTTTCTGCTCCTAATATAGCTAATGCAGC TATGTTCCATCAATCCATAAGAGATAATAATGGAGTTATTAGTATGAGCCATATTGAGCATTTATTAATTCCTCTACAAA CTACATTTAAATTAAAACCTGGAGGTTTCCATATTATGCTAACTGGAGTTACAAAACAATTAACAGTTGGTGATTCATTC GATCTGACTTTTTGTATGAAAGATCAAAGTACTAAAACAATTAAAGTTCAGGTTAAGAAATAG
Upstream 100 bases:
>100_bases ATAATAAATATAAATAATTATACTTTGTATTCATTTTATCTTTTATACATAAAGAAATACAGTTATTATATATACTATTT TTTACAAATTGGAAAGATAT
Downstream 100 bases:
>100_bases AGTTTAATAATGTCAGATTATGATAAGAAAAAGATGAAAGGCATAGAATAAAAGGTATAGGAAGAGAAAATGTTGAGTTA TAAAGAAAAATTTAAATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MRKSTLILLTLSNIFTWQICATELQLEPKEVSSSCCLVHHNSQHSDQDNTSLSNNNEFSNTAVQFLNAWARPAEKGKNTA VYLTINNQSLSNLEIIGVSAPNIANAAMFHQSIRDNNGVISMSHIEHLLIPLQTTFKLKPGGFHIMLTGVTKQLTVGDSF DLTFCMKDQSTKTIKVQVKK
Sequences:
>Translated_180_residues MRKSTLILLTLSNIFTWQICATELQLEPKEVSSSCCLVHHNSQHSDQDNTSLSNNNEFSNTAVQFLNAWARPAEKGKNTA VYLTINNQSLSNLEIIGVSAPNIANAAMFHQSIRDNNGVISMSHIEHLLIPLQTTFKLKPGGFHIMLTGVTKQLTVGDSF DLTFCMKDQSTKTIKVQVKK >Mature_180_residues MRKSTLILLTLSNIFTWQICATELQLEPKEVSSSCCLVHHNSQHSDQDNTSLSNNNEFSNTAVQFLNAWARPAEKGKNTA VYLTINNQSLSNLEIIGVSAPNIANAAMFHQSIRDNNGVISMSHIEHLLIPLQTTFKLKPGGFHIMLTGVTKQLTVGDSF DLTFCMKDQSTKTIKVQVKK
Specific function: Unknown
COG id: COG2847
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007410 [H]
Pfam domain/function: PF04314 DUF461 [H]
EC number: NA
Molecular weight: Translated: 19989; Mature: 19989
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKSTLILLTLSNIFTWQICATELQLEPKEVSSSCCLVHHNSQHSDQDNTSLSNNNEFSN CCCCEEEEEEECCEEEEEEEEEEEEECHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHH TAVQFLNAWARPAEKGKNTAVYLTINNQSLSNLEIIGVSAPNIANAAMFHQSIRDNNGVI HHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEE SMSHIEHLLIPLQTTFKLKPGGFHIMLTGVTKQLTVGDSFDLTFCMKDQSTKTIKVQVKK EHHHHHEEEEECEEEEEECCCCEEEEEECCEEEEEECCCCCEEEEECCCCCEEEEEEEEC >Mature Secondary Structure MRKSTLILLTLSNIFTWQICATELQLEPKEVSSSCCLVHHNSQHSDQDNTSLSNNNEFSN CCCCEEEEEEECCEEEEEEEEEEEEECHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHH TAVQFLNAWARPAEKGKNTAVYLTINNQSLSNLEIIGVSAPNIANAAMFHQSIRDNNGVI HHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEE SMSHIEHLLIPLQTTFKLKPGGFHIMLTGVTKQLTVGDSFDLTFCMKDQSTKTIKVQVKK EHHHHHEEEEECEEEEEECCCCEEEEEECCEEEEEECCCCCEEEEECCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]