| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184151
Identifier: 189184151
GI number: 189184151
Start: 1277073
End: 1277180
Strand: Reverse
Name: 189184151
Synonym: OTT_1244
Alternate gene names: NA
Gene position: 1277180-1277073 (Counterclockwise)
Preceding gene: 189184153
Following gene: 189184150
Centisome position: 63.57
GC content: 31.48
Gene sequence:
>108_bases ATGAAAATCAGTGTTAAAGAAGATTTAGAGCTAAATAACAAACCAAAGGCTGAATCTGATGTTAGGTCTAATAGCAAATT ATCAGAACTAACGAGTATTATTCGCTGA
Upstream 100 bases:
>100_bases CTATCAACATAATAATTATGATACTATATTCAAAATTAGTCAACTAATTATCATACTTAAATTAAATCTATGCTCGATAT AAGTAGTATTCTAAGAACAT
Downstream 100 bases:
>100_bases AAGCTAGGTAATTGCCTTAATTTTTATAAGCATCACAATAATGCTTGTTTCGTATTTTTTATCTGAAAGTGGTAAAACGA AAGAATCTATAACTTTTATG
Product: putative conjugative transfer protein TraB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 35; Mature: 35
Protein sequence:
>35_residues MKISVKEDLELNNKPKAESDVRSNSKLSELTSIIR
Sequences:
>Translated_35_residues MKISVKEDLELNNKPKAESDVRSNSKLSELTSIIR >Mature_35_residues MKISVKEDLELNNKPKAESDVRSNSKLSELTSIIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3974; Mature: 3974
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISVKEDLELNNKPKAESDVRSNSKLSELTSIIR CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC >Mature Secondary Structure MKISVKEDLELNNKPKAESDVRSNSKLSELTSIIR CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA