| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184146
Identifier: 189184146
GI number: 189184146
Start: 1273546
End: 1273827
Strand: Direct
Name: 189184146
Synonym: OTT_1239
Alternate gene names: NA
Gene position: 1273546-1273827 (Clockwise)
Preceding gene: 189184145
Following gene: 189184148
Centisome position: 63.39
GC content: 32.27
Gene sequence:
>282_bases ATGGATGTAAGATTAGGATTTATGTGTCATAACAACTATAGAGATAACTTTGTTCAAGGAAATTATTATTACAATATAAT TGAAGGTAACAAAGCATCAATTTTTGTTACAGGTGGCCTAGTATCAGTTTTCAATGGTGATAGCGGTACTGGTATAGACT TAGGAGTTGGTACAACAATAAACTTATCAAGAGATACATATTTAGACATTGAATGTAGCACAATTGCTAACTATAGACCA CTTCCTATTCATATACGATTTGGATGGCGGGTTCACATTTAA
Upstream 100 bases:
>100_bases CTGGACTTTCACCAGTAAGATTAATTCACCTTATCTTGACGCACCTACTAACTATGATACATTAGAAGCTGGAGTTGGTT ATAGATTATCTCTGCACAGA
Downstream 100 bases:
>100_bases TTGCTAAGCTCAGGTCGAATAGTTAGTAATGATTAGCTCATTAACAGGATTGCGTTGTTCATTGATTGAGTATGTAACTC CAATATGAGTGATGAAGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MDVRLGFMCHNNYRDNFVQGNYYYNIIEGNKASIFVTGGLVSVFNGDSGTGIDLGVGTTINLSRDTYLDIECSTIANYRP LPIHIRFGWRVHI
Sequences:
>Translated_93_residues MDVRLGFMCHNNYRDNFVQGNYYYNIIEGNKASIFVTGGLVSVFNGDSGTGIDLGVGTTINLSRDTYLDIECSTIANYRP LPIHIRFGWRVHI >Mature_93_residues MDVRLGFMCHNNYRDNFVQGNYYYNIIEGNKASIFVTGGLVSVFNGDSGTGIDLGVGTTINLSRDTYLDIECSTIANYRP LPIHIRFGWRVHI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10479; Mature: 10479
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVRLGFMCHNNYRDNFVQGNYYYNIIEGNKASIFVTGGLVSVFNGDSGTGIDLGVGTTI CCEEEEEEEECCCCCCEEECCEEEEEEECCCEEEEEECCEEEEEECCCCCEEEECCCCEE NLSRDTYLDIECSTIANYRPLPIHIRFGWRVHI EECCCEEEEEEEHHCCCCCCCEEEEEEEEEEEC >Mature Secondary Structure MDVRLGFMCHNNYRDNFVQGNYYYNIIEGNKASIFVTGGLVSVFNGDSGTGIDLGVGTTI CCEEEEEEEECCCCCCEEECCEEEEEEECCCEEEEEECCEEEEEECCCCCEEEECCCCEE NLSRDTYLDIECSTIANYRPLPIHIRFGWRVHI EECCCEEEEEEEHHCCCCCCCEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA