Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184117

Identifier: 189184117

GI number: 189184117

Start: 1239289

End: 1239681

Strand: Direct

Name: 189184117

Synonym: OTT_1210

Alternate gene names: NA

Gene position: 1239289-1239681 (Clockwise)

Preceding gene: 189184116

Following gene: 189184118

Centisome position: 61.69

GC content: 32.06

Gene sequence:

>393_bases
ATGAATCATCTCTTTAAGCAAAATGCTATACAAGAGCTGGTTAAATATAATAAATGCTTACTTTCAGTAACTATATTGCT
AGCTGCAGCTAATATAATTGCGATAATGGCTGCAATTGCCAAAGAAGAAAAGTGGTTATTAATTCCAGCAATGGAGCCTG
ATCGTAAAATGACGGTTTCATCAAAAAATTACCATGAAACCTATTTAAAGGAATGGGCAATTTATGTGACGAAACTCTTA
TTTACTACTTCTCCAAATGAGGTAGAAAGACAAATAGCAGACATGAAAGTGGCATCTAGTAATACTGAATCTTTAAATAA
ATTTTTTCATGATCACTTGCAATTTGTTAAAGGCTCAAATGTGTCTTCAGTCTTTTTTTCTAAAGAAGGTTGA

Upstream 100 bases:

>100_bases
TATCGGAGAATTTTTTGCTAAAAAGTTTTTTAGTAGCTAAAGGTTTATTGCCAGCTCCATTAGGATATTCAAGACTGCTG
GGCAAAAAAGTTGGCAAATA

Downstream 100 bases:

>100_bases
AGTGATAAATGAATGGAGTATTAATTAGTGGGACGCTTCGTTATTGGTTTAGCGATAGTAAACATATAGCTGTCGATAAG
ACTTACCTTTTAACTTACAA

Product: putative conjugative transfer protein TraE

Products: NA

Alternate protein names: Conjugative Transfer Protein

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MNHLFKQNAIQELVKYNKCLLSVTILLAAANIIAIMAAIAKEEKWLLIPAMEPDRKMTVSSKNYHETYLKEWAIYVTKLL
FTTSPNEVERQIADMKVASSNTESLNKFFHDHLQFVKGSNVSSVFFSKEG

Sequences:

>Translated_130_residues
MNHLFKQNAIQELVKYNKCLLSVTILLAAANIIAIMAAIAKEEKWLLIPAMEPDRKMTVSSKNYHETYLKEWAIYVTKLL
FTTSPNEVERQIADMKVASSNTESLNKFFHDHLQFVKGSNVSSVFFSKEG
>Mature_130_residues
MNHLFKQNAIQELVKYNKCLLSVTILLAAANIIAIMAAIAKEEKWLLIPAMEPDRKMTVSSKNYHETYLKEWAIYVTKLL
FTTSPNEVERQIADMKVASSNTESLNKFFHDHLQFVKGSNVSSVFFSKEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14841; Mature: 14841

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHLFKQNAIQELVKYNKCLLSVTILLAAANIIAIMAAIAKEEKWLLIPAMEPDRKMTVS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEC
SKNYHETYLKEWAIYVTKLLFTTSPNEVERQIADMKVASSNTESLNKFFHDHLQFVKGSN
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC
VSSVFFSKEG
CCEEEEECCC
>Mature Secondary Structure
MNHLFKQNAIQELVKYNKCLLSVTILLAAANIIAIMAAIAKEEKWLLIPAMEPDRKMTVS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEC
SKNYHETYLKEWAIYVTKLLFTTSPNEVERQIADMKVASSNTESLNKFFHDHLQFVKGSN
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC
VSSVFFSKEG
CCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA