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The map label for this gene is intA [C]

Identifier: 189184114

GI number: 189184114

Start: 1237989

End: 1238606

Strand: Direct

Name: intA [C]

Synonym: OTT_1207

Alternate gene names: 189184114

Gene position: 1237989-1238606 (Clockwise)

Preceding gene: 189184112

Following gene: 189184115

Centisome position: 61.62

GC content: 30.58

Gene sequence:

>618_bases
ATGTGCATGAAAAATATGCTGAATATAGTCGTATTTATCATGAAAAAAGTTAGAAAGAAAACCTATGTAATGGTAAAGAA
TTATGCAGCACCTTTCTACGATAAAAATATATCTGAGGTTACCGTAGAAGATATTCAGAAGCTTTTTGACGAAAAAATAG
CAAAGGAATACTATGTAACAGCAAACAATATTCTTATGAAATTAAACCCTATATTTAATAAAGCTATAGAATGGGGATTA
ATAGATAAAAATCCTGTTCAGAGAATAAAAATGCACAAGCAAGAATCAAGATCTAGATATGTAACAAATGAAGAAATTGG
AAGACTTATGGCCGTGCTAAAAGAAAAGGAAAATAGTCAATTAACAGAATCGCAAAAGCGAGCAGAACGATCAGGAAAAA
TTTTTACATTTATAAGTTTATTCACTGCAGCACGTAAAAGTAATGTATCAGGAATGAGATGGGACGAGATAAGATTTGAA
GAGAAAATATGGCATATACCAAAAACTAAGAGTAAAAGTGGAAAGACACTATATATAGGATTAGCTGATGCATTAATAAC
AATATTGAAATACCTAAAGCAAGAAACAAATAGTGAATGGTATTGCCAAGCCCAATAG

Upstream 100 bases:

>100_bases
AATAAACATTGGTGGCATATATTATAAGATAAAAATAGGAACTTTACCCGATCTGACTGTAACAGAGGCTAGGAAGAAGG
TAATGAACTAACATTAGGAC

Downstream 100 bases:

>100_bases
ATAATAGCAAACACTGGTTAAATGAGACAATACAATGTGCATGGGATAAAATTCGCAAAAAAGCTAGAATACCGAATGTA
ACAATACATGATCTTAGAAG

Product: putative integrase

Products: NA

Alternate protein names: Phage-Related Integrase; Integrase Family Protein; Site-Specific Recombinase Phage Integrase Family; Phage Integrase; Site-Specific Recombinase Phage Integrase Family Protein; Phage Integrase Family Site Specific Recombinase

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MCMKNMLNIVVFIMKKVRKKTYVMVKNYAAPFYDKNISEVTVEDIQKLFDEKIAKEYYVTANNILMKLNPIFNKAIEWGL
IDKNPVQRIKMHKQESRSRYVTNEEIGRLMAVLKEKENSQLTESQKRAERSGKIFTFISLFTAARKSNVSGMRWDEIRFE
EKIWHIPKTKSKSGKTLYIGLADALITILKYLKQETNSEWYCQAQ

Sequences:

>Translated_205_residues
MCMKNMLNIVVFIMKKVRKKTYVMVKNYAAPFYDKNISEVTVEDIQKLFDEKIAKEYYVTANNILMKLNPIFNKAIEWGL
IDKNPVQRIKMHKQESRSRYVTNEEIGRLMAVLKEKENSQLTESQKRAERSGKIFTFISLFTAARKSNVSGMRWDEIRFE
EKIWHIPKTKSKSGKTLYIGLADALITILKYLKQETNSEWYCQAQ
>Mature_205_residues
MCMKNMLNIVVFIMKKVRKKTYVMVKNYAAPFYDKNISEVTVEDIQKLFDEKIAKEYYVTANNILMKLNPIFNKAIEWGL
IDKNPVQRIKMHKQESRSRYVTNEEIGRLMAVLKEKENSQLTESQKRAERSGKIFTFISLFTAARKSNVSGMRWDEIRFE
EKIWHIPKTKSKSGKTLYIGLADALITILKYLKQETNSEWYCQAQ

Specific function: Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From The Host Genome. [C]

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24152; Mature: 24152

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCMKNMLNIVVFIMKKVRKKTYVMVKNYAAPFYDKNISEVTVEDIQKLFDEKIAKEYYVT
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEE
ANNILMKLNPIFNKAIEWGLIDKNPVQRIKMHKQESRSRYVTNEEIGRLMAVLKEKENSQ
CCCEEEEECHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCH
LTESQKRAERSGKIFTFISLFTAARKSNVSGMRWDEIRFEEKIWHIPKTKSKSGKTLYIG
HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEE
LADALITILKYLKQETNSEWYCQAQ
HHHHHHHHHHHHHHHCCCCEEEECC
>Mature Secondary Structure
MCMKNMLNIVVFIMKKVRKKTYVMVKNYAAPFYDKNISEVTVEDIQKLFDEKIAKEYYVT
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEE
ANNILMKLNPIFNKAIEWGLIDKNPVQRIKMHKQESRSRYVTNEEIGRLMAVLKEKENSQ
CCCEEEEECHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCH
LTESQKRAERSGKIFTFISLFTAARKSNVSGMRWDEIRFEEKIWHIPKTKSKSGKTLYIG
HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEE
LADALITILKYLKQETNSEWYCQAQ
HHHHHHHHHHHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA