| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is pkcI [C]
Identifier: 189184100
GI number: 189184100
Start: 1221915
End: 1222286
Strand: Direct
Name: pkcI [C]
Synonym: OTT_1193
Alternate gene names: 189184100
Gene position: 1221915-1222286 (Clockwise)
Preceding gene: 189184099
Following gene: 189184101
Centisome position: 60.82
GC content: 28.23
Gene sequence:
>372_bases ATGAGTATAGTAACTCAATTTTTTTCATACGATAGAAATAATGTTTTTGCTAAAATTCTTCGTAATGAACTAAGCGCTAA TATAGTATATAAAGATGATAAGATTTTAGCTTTTCATGATATTAATCCAATTGCCTCAACACATATACTGGTTATTCCTA ATGGAGAATATATAGATTATTGCGATTTTCTTTCTAAAGCATCGTCTGAGGATATTTGCCATTATTTTTCTACTATTAAC TCTATGGTTAAACAATTTAAACTTGATCAAAGTGGATTTAAGTTAGTAACTCATAATGGTAAGGGAGGTGGGCAAGAAAT TCCGCATTTTCATACTCATATCATTTCAAATCAGAAAATTGAGTCAAATTAA
Upstream 100 bases:
>100_bases AATAATAGCTATAGCATGTATTCTTGATTTGCTTGTATCTAATAAGTTATTTTGCTAAAATTTAAAGTACTGCTAATTAA ATACAATAGGAATATAGTTT
Downstream 100 bases:
>100_bases TATATTTTAAGCGTATTATTAAAAATACGCTCTTATATGTTTGGTATATAATAAATGTGATGAATAATAAAATTAACATA GCGGTTATAGGTGCTACAGG
Product: protein kinase C inhibitor 1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MSIVTQFFSYDRNNVFAKILRNELSANIVYKDDKILAFHDINPIASTHILVIPNGEYIDYCDFLSKASSEDICHYFSTIN SMVKQFKLDQSGFKLVTHNGKGGGQEIPHFHTHIISNQKIESN
Sequences:
>Translated_123_residues MSIVTQFFSYDRNNVFAKILRNELSANIVYKDDKILAFHDINPIASTHILVIPNGEYIDYCDFLSKASSEDICHYFSTIN SMVKQFKLDQSGFKLVTHNGKGGGQEIPHFHTHIISNQKIESN >Mature_122_residues SIVTQFFSYDRNNVFAKILRNELSANIVYKDDKILAFHDINPIASTHILVIPNGEYIDYCDFLSKASSEDICHYFSTINS MVKQFKLDQSGFKLVTHNGKGGGQEIPHFHTHIISNQKIESN
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HIT domain [H]
Homologues:
Organism=Homo sapiens, GI4885413, Length=116, Percent_Identity=31.0344827586207, Blast_Score=73, Evalue=7e-14, Organism=Escherichia coli, GI1787346, Length=108, Percent_Identity=32.4074074074074, Blast_Score=64, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17506713, Length=109, Percent_Identity=33.9449541284404, Blast_Score=79, Evalue=4e-16, Organism=Drosophila melanogaster, GI24581222, Length=117, Percent_Identity=30.7692307692308, Blast_Score=74, Evalue=2e-14, Organism=Drosophila melanogaster, GI28574010, Length=117, Percent_Identity=30.7692307692308, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011146 - InterPro: IPR011151 - InterPro: IPR019808 - InterPro: IPR001310 [H]
Pfam domain/function: PF01230 HIT [H]
EC number: NA
Molecular weight: Translated: 14025; Mature: 13894
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIVTQFFSYDRNNVFAKILRNELSANIVYKDDKILAFHDINPIASTHILVIPNGEYIDY CCHHHHHHHCCCCHHHHHHHHHHHCCEEEECCCCEEEEECCCCCCCEEEEEEECCCEEHH CDFLSKASSEDICHYFSTINSMVKQFKLDQSGFKLVTHNGKGGGQEIPHFHTHIISNQKI HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHCCCEE ESN CCC >Mature Secondary Structure SIVTQFFSYDRNNVFAKILRNELSANIVYKDDKILAFHDINPIASTHILVIPNGEYIDY CHHHHHHHCCCCHHHHHHHHHHHCCEEEECCCCEEEEECCCCCCCEEEEEEECCCEEHH CDFLSKASSEDICHYFSTINSMVKQFKLDQSGFKLVTHNGKGGGQEIPHFHTHIISNQKI HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHCCCEE ESN CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]