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The map label for this gene is vacJ [C]

Identifier: 189184079

GI number: 189184079

Start: 1199688

End: 1200521

Strand: Direct

Name: vacJ [C]

Synonym: OTT_1172

Alternate gene names: 189184079

Gene position: 1199688-1200521 (Clockwise)

Preceding gene: 189184078

Following gene: 189184080

Centisome position: 59.72

GC content: 26.86

Gene sequence:

>834_bases
ATGCGTATTATAGTTGCTATAATCATTACATGTACTACTGCTTTAATGATAAAAGCTGATACTTTATCTATTAAAAATAG
TGATAACTATAAGTATACAGAAAACATCAAAGAGGTCCAAGATAGCCATTACTCAGATATATTAGATATAAATGAAGAGA
TTTGTTTAAAAGCTTTTGATCCTTTAGAAAGGATTAATAGAAAAATCTTTTATTTGAACTTGTTTCTTGATTACATTCTT
TTAAGGCCAATAGCTAACTGTTACTATAAAGTAACAAACAATGATGTAAAAGTGGCTGTAGAAAATCTTATTAACAACAC
TGCTGTGCCAGTTACAGTTATAAATAGTGTATTACAATTTAAATTTAAGAATTCTATAGTTGGTATCTGGCAATTTATAG
TAAATACAATTTTAGGTATTGGAGGTTTACATAATATTGCAGCAGACTTTGGCTTGCAGTCTCAACCACTAAATTTTAGC
AGTACATTAGCTAGATATGGTGTTAAGTCTGGTCCGTATATTATTTTACCAATTTTTGGTGGCATGAATTTTAGAGATAT
CAGTAATATAGCATTTTCTCAGTTAAGTCCATTACAGTATATTATTGATAAAACTCATGCTGATAAATTAATTAATACAG
ACATTCTATTTAATAAGAAATTTGCTAAAGGAGTTAAAATCATTGACATGGTAAATAAAAGAACTAAATTGTTCGGTAAT
GCTGAATTTGTCATGAAAAACTCAATAGATCCTTATTCTGTATATAGAAATATTTCATACCAAACATCAGATTATTTTAA
AAAATGTAGAACTAATAAAATTTCTAAGAAATGA

Upstream 100 bases:

>100_bases
ATCAAAATTTATCTTATAGCATTCTAATACTTAGAAAATAGATATCTAAAGTACTTTGCTATTTGTTATCAATTAATGTA
GTTAATAATAAAAATTAATA

Downstream 100 bases:

>100_bases
TTATGATACAGCTAAAACGTAATATTATTATTTTCTTGTTTTTTATATGTAGCGCTATTCCTGCTTATGCTACACAAGAT
GTGAAAGAATATGTCGATAG

Product: Vacj lipoprotein precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MRIIVAIIITCTTALMIKADTLSIKNSDNYKYTENIKEVQDSHYSDILDINEEICLKAFDPLERINRKIFYLNLFLDYIL
LRPIANCYYKVTNNDVKVAVENLINNTAVPVTVINSVLQFKFKNSIVGIWQFIVNTILGIGGLHNIAADFGLQSQPLNFS
STLARYGVKSGPYIILPIFGGMNFRDISNIAFSQLSPLQYIIDKTHADKLINTDILFNKKFAKGVKIIDMVNKRTKLFGN
AEFVMKNSIDPYSVYRNISYQTSDYFKKCRTNKISKK

Sequences:

>Translated_277_residues
MRIIVAIIITCTTALMIKADTLSIKNSDNYKYTENIKEVQDSHYSDILDINEEICLKAFDPLERINRKIFYLNLFLDYIL
LRPIANCYYKVTNNDVKVAVENLINNTAVPVTVINSVLQFKFKNSIVGIWQFIVNTILGIGGLHNIAADFGLQSQPLNFS
STLARYGVKSGPYIILPIFGGMNFRDISNIAFSQLSPLQYIIDKTHADKLINTDILFNKKFAKGVKIIDMVNKRTKLFGN
AEFVMKNSIDPYSVYRNISYQTSDYFKKCRTNKISKK
>Mature_277_residues
MRIIVAIIITCTTALMIKADTLSIKNSDNYKYTENIKEVQDSHYSDILDINEEICLKAFDPLERINRKIFYLNLFLDYIL
LRPIANCYYKVTNNDVKVAVENLINNTAVPVTVINSVLQFKFKNSIVGIWQFIVNTILGIGGLHNIAADFGLQSQPLNFS
STLARYGVKSGPYIILPIFGGMNFRDISNIAFSQLSPLQYIIDKTHADKLINTDILFNKKFAKGVKIIDMVNKRTKLFGN
AEFVMKNSIDPYSVYRNISYQTSDYFKKCRTNKISKK

Specific function: Unknown

COG id: COG2853

COG function: function code M; Surface lipoprotein

Gene ontology:

Cell location: Attached To The Outer Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaA family [H]

Homologues:

Organism=Escherichia coli, GI1788688, Length=210, Percent_Identity=28.0952380952381, Blast_Score=89, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007428 [H]

Pfam domain/function: PF04333 VacJ [H]

EC number: NA

Molecular weight: Translated: 31629; Mature: 31629

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIIVAIIITCTTALMIKADTLSIKNSDNYKYTENIKEVQDSHYSDILDINEEICLKAFD
CEEEEEEHHHHHHHHEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
PLERINRKIFYLNLFLDYILLRPIANCYYKVTNNDVKVAVENLINNTAVPVTVINSVLQF
HHHHHCHHEEHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHH
KFKNSIVGIWQFIVNTILGIGGLHNIAADFGLQSQPLNFSSTLARYGVKSGPYIILPIFG
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCEEEEECCC
GMNFRDISNIAFSQLSPLQYIIDKTHADKLINTDILFNKKFAKGVKIIDMVNKRTKLFGN
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHEECCHHHCCHHHHHHHHHHHHHCCC
AEFVMKNSIDPYSVYRNISYQTSDYFKKCRTNKISKK
EEEEEECCCCHHHHHHCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRIIVAIIITCTTALMIKADTLSIKNSDNYKYTENIKEVQDSHYSDILDINEEICLKAFD
CEEEEEEHHHHHHHHEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
PLERINRKIFYLNLFLDYILLRPIANCYYKVTNNDVKVAVENLINNTAVPVTVINSVLQF
HHHHHCHHEEHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHH
KFKNSIVGIWQFIVNTILGIGGLHNIAADFGLQSQPLNFSSTLARYGVKSGPYIILPIFG
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCEEEEECCC
GMNFRDISNIAFSQLSPLQYIIDKTHADKLINTDILFNKKFAKGVKIIDMVNKRTKLFGN
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHEECCHHHCCHHHHHHHHHHHHHCCC
AEFVMKNSIDPYSVYRNISYQTSDYFKKCRTNKISKK
EEEEEECCCCHHHHHHCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA