| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184017
Identifier: 189184017
GI number: 189184017
Start: 1143206
End: 1143586
Strand: Reverse
Name: 189184017
Synonym: OTT_1110
Alternate gene names: NA
Gene position: 1143586-1143206 (Counterclockwise)
Preceding gene: 189184018
Following gene: 189184015
Centisome position: 56.92
GC content: 25.98
Gene sequence:
>381_bases ATGTATTTATACGAGGTTTATTACAATCCAAATGCAAAAGTGCATCAGGTAATATTATCAAGGCATGGCTTTTCTATTAA AGCAGCTATATTTAGTTTTCTATGGGCTGGATATCATGGTATGTGGTATATATTAATATCAGGAATACTAATCAATTCTA TTATAATATTTGGAATAGATAATCCAATTATGTTAACTTTAGGTCAAATAACACTAATTACAATATCTATATTTTTTGGT ATTTTTGCTAGTGATATTCTAACATTCCATTTAAATATCAAAGGTTATCAACTTTATGACATTGTATATGCTAACTCAAC AATTGATGGAGAATATAAGTTTTACAAAAAGCTTTTGAGAAAATATACAAAGCAAAATTAG
Upstream 100 bases:
>100_bases TCATATTGAGTAATATGCGCTATTAATTATTACATTAAATAATATTTAGTGTAAAAATTGCAAAGTATTATTAAGAGTTT ATATAAATTTAAGCAGTATC
Downstream 100 bases:
>100_bases TAGCCACACTTGCTATTATATAAATTATACTTAAACTTAAGCTTTATATAAAATATGGTGTACTCTTAATGCAAAGCAAG ATACAAGGTATACCAACCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MYLYEVYYNPNAKVHQVILSRHGFSIKAAIFSFLWAGYHGMWYILISGILINSIIIFGIDNPIMLTLGQITLITISIFFG IFASDILTFHLNIKGYQLYDIVYANSTIDGEYKFYKKLLRKYTKQN
Sequences:
>Translated_126_residues MYLYEVYYNPNAKVHQVILSRHGFSIKAAIFSFLWAGYHGMWYILISGILINSIIIFGIDNPIMLTLGQITLITISIFFG IFASDILTFHLNIKGYQLYDIVYANSTIDGEYKFYKKLLRKYTKQN >Mature_126_residues MYLYEVYYNPNAKVHQVILSRHGFSIKAAIFSFLWAGYHGMWYILISGILINSIIIFGIDNPIMLTLGQITLITISIFFG IFASDILTFHLNIKGYQLYDIVYANSTIDGEYKFYKKLLRKYTKQN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14664; Mature: 14664
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLYEVYYNPNAKVHQVILSRHGFSIKAAIFSFLWAGYHGMWYILISGILINSIIIFGID CEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC NPIMLTLGQITLITISIFFGIFASDILTFHLNIKGYQLYDIVYANSTIDGEYKFYKKLLR CCEEEEECHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEEEEECCCCCCCHHHHHHHHH KYTKQN HHHCCC >Mature Secondary Structure MYLYEVYYNPNAKVHQVILSRHGFSIKAAIFSFLWAGYHGMWYILISGILINSIIIFGID CEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC NPIMLTLGQITLITISIFFGIFASDILTFHLNIKGYQLYDIVYANSTIDGEYKFYKKLLR CCEEEEECHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEEEEECCCCCCCHHHHHHHHH KYTKQN HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]