| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184011
Identifier: 189184011
GI number: 189184011
Start: 1134977
End: 1135168
Strand: Direct
Name: 189184011
Synonym: OTT_1104
Alternate gene names: NA
Gene position: 1134977-1135168 (Clockwise)
Preceding gene: 189183998
Following gene: 189184012
Centisome position: 56.49
GC content: 29.17
Gene sequence:
>192_bases ATGCCAAAATCATATAGCCAAGACTTTCAAGATAAAGTAATGAAATGTGTTAATCGAGGAAAAAGTTGTAATGCTACCTC AGTAAAATTTGATATAGCAGAAAACACAGTAAGAAATTGGTATAAAAGATATAAATCAGAAGGTCATTATAAAGAAAGAT CACGCCCTAGCAAAAAAGGAAAAAATAGATAA
Upstream 100 bases:
>100_bases CAACATCAAATAATTATAGTCAAAAAAACGTGACTCCAAGGTTAGAAGCTTCATTATAGTCATTTACAATGAAGTTTGCA TATAATATCCTGAAAAGAAA
Downstream 100 bases:
>100_bases GATAGAATTTGAAAAATACGTTTTGCTAAATCCAAATGTAACTCTTGCACAAGTGGGAAAGCATTTTAAAATTTCAATAA GAGGAGCAAGTTATTACATG
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 63; Mature: 62
Protein sequence:
>63_residues MPKSYSQDFQDKVMKCVNRGKSCNATSVKFDIAENTVRNWYKRYKSEGHYKERSRPSKKGKNR
Sequences:
>Translated_63_residues MPKSYSQDFQDKVMKCVNRGKSCNATSVKFDIAENTVRNWYKRYKSEGHYKERSRPSKKGKNR >Mature_62_residues PKSYSQDFQDKVMKCVNRGKSCNATSVKFDIAENTVRNWYKRYKSEGHYKERSRPSKKGKNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7493; Mature: 7361
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKSYSQDFQDKVMKCVNRGKSCNATSVKFDIAENTVRNWYKRYKSEGHYKERSRPSKKG CCCCCCCCHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCC KNR CCC >Mature Secondary Structure PKSYSQDFQDKVMKCVNRGKSCNATSVKFDIAENTVRNWYKRYKSEGHYKERSRPSKKG CCCCCCCHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCC KNR CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA