| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184008
Identifier: 189184008
GI number: 189184008
Start: 1133652
End: 1133966
Strand: Reverse
Name: 189184008
Synonym: OTT_1101
Alternate gene names: NA
Gene position: 1133966-1133652 (Counterclockwise)
Preceding gene: 189184009
Following gene: 189184007
Centisome position: 56.44
GC content: 28.89
Gene sequence:
>315_bases TTGTTTAGTGATAAAGCTTACATATCTAAAGAGTTATTTCATCAACTGTTGACCAATGGTTTACGTTTATTTACTAATCT TCGTAAAGATATGAAAACATATTTATTGGACATGCAAGATAATAGGTTATTAAATAAACGTTCTTTAATTGAGTCTGTCT TTAATGTACTAAAAAAACATATGCTTTTAGAGCATACTAGACACCGTTCTCCTCTTAATTTTTTTGTTCATATAATTGCT TCTCTTGCTAGTTATTCTATCTCTAAACTTAATCCCCATCTTATCTCTTCTTCTTTTCCTGACTCCTTATCCTAA
Upstream 100 bases:
>100_bases TACATCTTATAATCAATAATAAAGGCGAAATAATGTCAGTTAAAATAATAAAAGCCACCTATCTGTATCTTCAGTTTTTT CTAAAGGCTTATCTGGTAAA
Downstream 100 bases:
>100_bases AATTGACGTTTTGAAAGCAATAACTGCAGATAAGCTATATGTAATGATACGAAGTTATCAGGAAAGCATAATATAGTAAA TCCGTACGTTACGTTTGATG
Product: transposase
Products: NA
Alternate protein names: Transposase IS4 Family Protein; ISPg3 Transposase; Transposase And Inactivated Derivative; Transposase IS4 Family; IS4 Family Transposase; Membrane-Associated Metal-Dependent Hydrolase
Number of amino acids: Translated: 104; Mature: 104
Protein sequence:
>104_residues MFSDKAYISKELFHQLLTNGLRLFTNLRKDMKTYLLDMQDNRLLNKRSLIESVFNVLKKHMLLEHTRHRSPLNFFVHIIA SLASYSISKLNPHLISSSFPDSLS
Sequences:
>Translated_104_residues MFSDKAYISKELFHQLLTNGLRLFTNLRKDMKTYLLDMQDNRLLNKRSLIESVFNVLKKHMLLEHTRHRSPLNFFVHIIA SLASYSISKLNPHLISSSFPDSLS >Mature_104_residues MFSDKAYISKELFHQLLTNGLRLFTNLRKDMKTYLLDMQDNRLLNKRSLIESVFNVLKKHMLLEHTRHRSPLNFFVHIIA SLASYSISKLNPHLISSSFPDSLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12177; Mature: 12177
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSDKAYISKELFHQLLTNGLRLFTNLRKDMKTYLLDMQDNRLLNKRSLIESVFNVLKKH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH MLLEHTRHRSPLNFFVHIIASLASYSISKLNPHLISSSFPDSLS HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCC >Mature Secondary Structure MFSDKAYISKELFHQLLTNGLRLFTNLRKDMKTYLLDMQDNRLLNKRSLIESVFNVLKKH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH MLLEHTRHRSPLNFFVHIIASLASYSISKLNPHLISSSFPDSLS HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA