| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183997
Identifier: 189183997
GI number: 189183997
Start: 1122302
End: 1122703
Strand: Reverse
Name: 189183997
Synonym: OTT_1090
Alternate gene names: NA
Gene position: 1122703-1122302 (Counterclockwise)
Preceding gene: 189183999
Following gene: 189183996
Centisome position: 55.88
GC content: 25.87
Gene sequence:
>402_bases TTGAAGCATAGTTCTGATGTTATTAATTTACTTAATCAGAATAAATGTACAGCTTTACATTATGCTGCTTTGCATGGTAA CATAGGTAGTATAAAGTTACTGTTAAAGTATAATTCTAAAATTAGTAATTTACAGGATATTTGTGGAAATACTGCTTTGC ATTATGCTGCTGCCAGATGTCACATAGACAGTGTAAAGCTTTTGTTGAATCATAATAATCTTGAAATTGAATTACAGGAC TATCTTTATATTGATATTATTAATAATAATGCATTAAATACATATGAAAAAGAAGTGCTTGAATTATTCATAACTCATGC TGTAAAAGACACTTTAGTAAAGATATTAACTCAAAAATTGTTACACAGAATACAAATTTTATACAAAATTCACCAAATTT AA
Upstream 100 bases:
>100_bases TTGTGCAGCTTCAGCTCTGCCTTTAGCTATGCCTTCGTCAATATATTGTGCAGCAATTGTTCCCATAATCCTTTGGATAT GAGATATTGTAGAGCTTTTA
Downstream 100 bases:
>100_bases ACGAATTAGCTCAAAGATGTGAACAAGAAATACAAAAAATGCAAAATATTAAGATTGGTAGGAGCGATAAAACTATATAT AGTATGTACTTATTAGCAAA
Product: ankyrin repeat-containing protein 10_04
Products: NA
Alternate protein names: Ankyrin Repeat-Containing Protein
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MKHSSDVINLLNQNKCTALHYAALHGNIGSIKLLLKYNSKISNLQDICGNTALHYAAARCHIDSVKLLLNHNNLEIELQD YLYIDIINNNALNTYEKEVLELFITHAVKDTLVKILTQKLLHRIQILYKIHQI
Sequences:
>Translated_133_residues MKHSSDVINLLNQNKCTALHYAALHGNIGSIKLLLKYNSKISNLQDICGNTALHYAAARCHIDSVKLLLNHNNLEIELQD YLYIDIINNNALNTYEKEVLELFITHAVKDTLVKILTQKLLHRIQILYKIHQI >Mature_133_residues MKHSSDVINLLNQNKCTALHYAALHGNIGSIKLLLKYNSKISNLQDICGNTALHYAAARCHIDSVKLLLNHNNLEIELQD YLYIDIINNNALNTYEKEVLELFITHAVKDTLVKILTQKLLHRIQILYKIHQI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15256; Mature: 15256
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHSSDVINLLNQNKCTALHYAALHGNIGSIKLLLKYNSKISNLQDICGNTALHYAAARC CCCCHHHHHHHCCCCCHHEEHHHHCCCCCCEEEEEEECCCHHHHHHHHCCHHHHHHHHHH HIDSVKLLLNHNNLEIELQDYLYIDIINNNALNTYEKEVLELFITHAVKDTLVKILTQKL HHHHEEEEEECCCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LHRIQILYKIHQI HHHHHHHHHHHCC >Mature Secondary Structure MKHSSDVINLLNQNKCTALHYAALHGNIGSIKLLLKYNSKISNLQDICGNTALHYAAARC CCCCHHHHHHHCCCCCHHEEHHHHCCCCCCEEEEEEECCCHHHHHHHHCCHHHHHHHHHH HIDSVKLLLNHNNLEIELQDYLYIDIINNNALNTYEKEVLELFITHAVKDTLVKILTQKL HHHHEEEEEECCCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LHRIQILYKIHQI HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA