Click here to switch to the map view.

The map label for this gene is ubiX [C]

Identifier: 189183990

GI number: 189183990

Start: 1115832

End: 1116395

Strand: Reverse

Name: ubiX [C]

Synonym: OTT_1083

Alternate gene names: 189183990

Gene position: 1116395-1115832 (Counterclockwise)

Preceding gene: 189183992

Following gene: 189183986

Centisome position: 55.57

GC content: 31.56

Gene sequence:

>564_bases
ATGTATAAACAAAATAATATTGTTGTTGCTATTACTGGAGCATCTGGAGCAATATTTGGTATTAAAGCTCTGGAGTTGCT
AAAAAATCATGGTATTGCTACTCATTTAATTATCTCTAAGGCAGCTACATTAACTATCTCAATTGAAACTAAGTTTACAA
TTAAGGATGTTATAAAGCTATCTACTTTTTATTATAAAAATTCTGATATTGCAGCTGCAATATCTAGTGGGTCATTTAAA
ACTTGTGGTATGATTGTTGCTCCTTGTAGCGCTAAAACGTTAACTTCCATTGCTCAAGGATATGAAGATAATTTAATTGT
AAGAGCAGCATCTGTTAATCTAAAGGAAAGAAGACGCTTAGTATTGATGTTTCGAGAATCTCCATATCACATAACACATT
TGGAAAATATGAGCAAGGTAACAAATATTGGAGGAATAATAGTACCACCTGTACCTGCATTTTACAATAAACCGGCAGAT
ATTGAAGATATTATTGAATACTCTGTTGGCAGAGCACTTGATTTATTTGACTTAGATATTAACCTTAATAGGTGGAAATC
ATAA

Upstream 100 bases:

>100_bases
GTTTAAGGCGCATGCCTGGAAAGCGTGTTTACGTTAACCGTATCAGGGGTTCAAATCCCCTCTTTTCCGCCATTTATCAT
TCATTATAGTATATATAGTA

Downstream 100 bases:

>100_bases
TTTTCCAACAGTTTGATATTTTATGTTTGATAAATATAAACAATAATAACTATAAGATATTAGATTTTTCGCAATCTTGA
ATAGTCAATTTAATTTGTTT

Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MYKQNNIVVAITGASGAIFGIKALELLKNHGIATHLIISKAATLTISIETKFTIKDVIKLSTFYYKNSDIAAAISSGSFK
TCGMIVAPCSAKTLTSIAQGYEDNLIVRAASVNLKERRRLVLMFRESPYHITHLENMSKVTNIGGIIVPPVPAFYNKPAD
IEDIIEYSVGRALDLFDLDINLNRWKS

Sequences:

>Translated_187_residues
MYKQNNIVVAITGASGAIFGIKALELLKNHGIATHLIISKAATLTISIETKFTIKDVIKLSTFYYKNSDIAAAISSGSFK
TCGMIVAPCSAKTLTSIAQGYEDNLIVRAASVNLKERRRLVLMFRESPYHITHLENMSKVTNIGGIIVPPVPAFYNKPAD
IEDIIEYSVGRALDLFDLDINLNRWKS
>Mature_187_residues
MYKQNNIVVAITGASGAIFGIKALELLKNHGIATHLIISKAATLTISIETKFTIKDVIKLSTFYYKNSDIAAAISSGSFK
TCGMIVAPCSAKTLTSIAQGYEDNLIVRAASVNLKERRRLVLMFRESPYHITHLENMSKVTNIGGIIVPPVPAFYNKPAD
IEDIIEYSVGRALDLFDLDINLNRWKS

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=186, Percent_Identity=46.7741935483871, Blast_Score=187, Evalue=3e-49,
Organism=Saccharomyces cerevisiae, GI6320746, Length=185, Percent_Identity=47.5675675675676, Blast_Score=176, Evalue=3e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.-

Molecular weight: Translated: 20578; Mature: 20578

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKQNNIVVAITGASGAIFGIKALELLKNHGIATHLIISKAATLTISIETKFTIKDVIKL
CCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCEEEEEEEEECEEHHHHHHH
STFYYKNSDIAAAISSGSFKTCGMIVAPCSAKTLTSIAQGYEDNLIVRAASVNLKERRRL
HHEEEECCCEEEEECCCCCCCCCEEEECCCHHHHHHHHCCCCCCEEEEEECCCHHHCCEE
VLMFRESPYHITHLENMSKVTNIGGIIVPPVPAFYNKPADIEDIIEYSVGRALDLFDLDI
EEEEECCCEEEEEHHHHHHHHHCCCEEECCCHHHCCCCCCHHHHHHHHCCCEEEEEEEEE
NLNRWKS
ECCCCCC
>Mature Secondary Structure
MYKQNNIVVAITGASGAIFGIKALELLKNHGIATHLIISKAATLTISIETKFTIKDVIKL
CCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCEEEEEEEEECEEHHHHHHH
STFYYKNSDIAAAISSGSFKTCGMIVAPCSAKTLTSIAQGYEDNLIVRAASVNLKERRRL
HHEEEECCCEEEEECCCCCCCCCEEEECCCHHHHHHHHCCCCCCEEEEEECCCHHHCCEE
VLMFRESPYHITHLENMSKVTNIGGIIVPPVPAFYNKPADIEDIIEYSVGRALDLFDLDI
EEEEECCCEEEEEHHHHHHHHHCCCEEECCCHHHCCCCCCHHHHHHHHCCCEEEEEEEEE
NLNRWKS
ECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]