Click here to switch to the map view.

The map label for this gene is trbG [H]

Identifier: 189183985

GI number: 189183985

Start: 1108942

End: 1109703

Strand: Direct

Name: trbG [H]

Synonym: OTT_1078

Alternate gene names: 189183985

Gene position: 1108942-1109703 (Clockwise)

Preceding gene: 189183984

Following gene: 189183987

Centisome position: 55.2

GC content: 28.08

Gene sequence:

>762_bases
ATGAGAAATAGCAATAATCAAATTAGTTTTTTTATTATATTATTAACTATTATAATGTTGCCGTTTAGAGTGATGGCTAT
TAGGGAACCTAAGCCTACAGCTATTGATAGCAGAATAAGGGTAATGACATATAGTCCAAATGATGTGTTTAAATTTACTG
GGTATTATAACTATCAGGGATGTATAGAGCTTGATAAAGGTGAAGAAATTGTAAATTTATCAATGGGAGATCCAAATGCA
TGGTTTATTCAAGAATTCGGTAATAGAATTTTTATAAAACCTATCAAGGATGATGCTACTACTAATATGCTTCTTATTAC
TAACAAACGTACTTACTTTTTTGAATTACATGCTGAGGAAGTACAAAATATTAATGATTCTAACATGATATTTAATGTAA
AATTTTTATATCCTGACAATGAGAAGAGTAATAGTACAAATTTAGTATCATTAACTTCAGAAGTAGATTTATCTCACCCA
GAAAATTATAATTTTTACTATACCATTAGTGGGCATCAGGAAATAGCACCAATAAAAATTTTTGATGATGGAGATTTTAC
TTATATATATTTTAGAGATAAAAATGTTGCAATGCCAACAGTATATATAGTAGGCGATAGGAAAAAAGAGTCGCTTGTAA
ATTTTAGAATAAGTACTAAAAATCCTAACTTGATGATTGTTGAACAAGTATCTCGTAGGTTATCTTTAAGATTAGGAAGA
AAAGTAGTATATGTATTTAACGAAGCGTTACTATCAAAGTAG

Upstream 100 bases:

>100_bases
ATTATTTTTGAAACAGATCAAGTTAATTTAAATGCTGCATCTGGTTCAATTTTTAAATTTTTTGTAACAGATTATAAAAT
AACATTACTACAGAATAATA

Downstream 100 bases:

>100_bases
TTAATTTTAATACTCAACAACTATTTGGGAGATTATAGCTTAAATTGTTAAGATATTAACTTTACTAAAAAAAAACAGTT
ACAGTTGTGGTAATGTTATA

Product: conjugal transfer protein TrbG precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MRNSNNQISFFIILLTIIMLPFRVMAIREPKPTAIDSRIRVMTYSPNDVFKFTGYYNYQGCIELDKGEEIVNLSMGDPNA
WFIQEFGNRIFIKPIKDDATTNMLLITNKRTYFFELHAEEVQNINDSNMIFNVKFLYPDNEKSNSTNLVSLTSEVDLSHP
ENYNFYYTISGHQEIAPIKIFDDGDFTYIYFRDKNVAMPTVYIVGDRKKESLVNFRISTKNPNLMIVEQVSRRLSLRLGR
KVVYVFNEALLSK

Sequences:

>Translated_253_residues
MRNSNNQISFFIILLTIIMLPFRVMAIREPKPTAIDSRIRVMTYSPNDVFKFTGYYNYQGCIELDKGEEIVNLSMGDPNA
WFIQEFGNRIFIKPIKDDATTNMLLITNKRTYFFELHAEEVQNINDSNMIFNVKFLYPDNEKSNSTNLVSLTSEVDLSHP
ENYNFYYTISGHQEIAPIKIFDDGDFTYIYFRDKNVAMPTVYIVGDRKKESLVNFRISTKNPNLMIVEQVSRRLSLRLGR
KVVYVFNEALLSK
>Mature_253_residues
MRNSNNQISFFIILLTIIMLPFRVMAIREPKPTAIDSRIRVMTYSPNDVFKFTGYYNYQGCIELDKGEEIVNLSMGDPNA
WFIQEFGNRIFIKPIKDDATTNMLLITNKRTYFFELHAEEVQNINDSNMIFNVKFLYPDNEKSNSTNLVSLTSEVDLSHP
ENYNFYYTISGHQEIAPIKIFDDGDFTYIYFRDKNVAMPTVYIVGDRKKESLVNFRISTKNPNLMIVEQVSRRLSLRLGR
KVVYVFNEALLSK

Specific function: Unknown

COG id: COG3504

COG function: function code U; Type IV secretory pathway, VirB9 components

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbG/virB9 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010258
- InterPro:   IPR014148 [H]

Pfam domain/function: PF03524 CagX [H]

EC number: NA

Molecular weight: Translated: 29545; Mature: 29545

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNSNNQISFFIILLTIIMLPFRVMAIREPKPTAIDSRIRVMTYSPNDVFKFTGYYNYQG
CCCCCCCEEHHHHHHHHHHHCEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEEECCCE
CIELDKGEEIVNLSMGDPNAWFIQEFGNRIFIKPIKDDATTNMLLITNKRTYFFELHAEE
EEEECCCCEEEEEECCCCCEEHHHHHCCEEEEEECCCCCCCEEEEEECCCEEEEEEEHHH
VQNINDSNMIFNVKFLYPDNEKSNSTNLVSLTSEVDLSHPENYNFYYTISGHQEIAPIKI
HCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCEEEEEE
FDDGDFTYIYFRDKNVAMPTVYIVGDRKKESLVNFRISTKNPNLMIVEQVSRRLSLRLGR
EECCCEEEEEEECCCCCCCEEEEEECCCCCCEEEEEEECCCCCEEEEHHHHHHHHHHHCC
KVVYVFNEALLSK
EEEEEEEHHHHCC
>Mature Secondary Structure
MRNSNNQISFFIILLTIIMLPFRVMAIREPKPTAIDSRIRVMTYSPNDVFKFTGYYNYQG
CCCCCCCEEHHHHHHHHHHHCEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEEECCCE
CIELDKGEEIVNLSMGDPNAWFIQEFGNRIFIKPIKDDATTNMLLITNKRTYFFELHAEE
EEEECCCCEEEEEECCCCCEEHHHHHCCEEEEEECCCCCCCEEEEEECCCEEEEEEEHHH
VQNINDSNMIFNVKFLYPDNEKSNSTNLVSLTSEVDLSHPENYNFYYTISGHQEIAPIKI
HCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCEEEEEE
FDDGDFTYIYFRDKNVAMPTVYIVGDRKKESLVNFRISTKNPNLMIVEQVSRRLSLRLGR
EECCCEEEEEEECCCCCCCEEEEEECCCCCCEEEEEEECCCCCEEEEHHHHHHHHHHHCC
KVVYVFNEALLSK
EEEEEEEHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12910271; 3584073 [H]