Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is rpmC

Identifier: 189183959

GI number: 189183959

Start: 1088392

End: 1088613

Strand: Direct

Name: rpmC

Synonym: OTT_1052

Alternate gene names: NA

Gene position: 1088392-1088613 (Clockwise)

Preceding gene: 189183958

Following gene: 189183960

Centisome position: 54.18

GC content: 20.27

Gene sequence:

>222_bases
ATGAATGAGTTTAAAAAATATAGCGATTTATGTAATATTGAATTGCAAGGTTTACGTGATTTATTATTAAGATATAAAAA
AAAATTATTTAATGATAGATTTCAAAATAGTGTTGATGTAGTTAATTCTGTTAAAAATTTTGGTTGTTTAAAGAAAAAAA
TAGCTCAAATTAGCACAGAAATTTTGCAAAGAACAATAAAAAAAAATGAGGAAGAAAAATAA

Upstream 100 bases:

>100_bases
ATATTGTTTGAGCTTGATGGAGTAAGTGAAGGTATAGCAATTAAAGCGTTAGAATTGGCTGGTGCTAAATTGCCAGTGCG
AACTAAAATAGTAAAGCGTT

Downstream 100 bases:

>100_bases
ATGCCAAGAAGAGTTTTACAGGGGCAGGTAATAAGTGCTAAATCAGATAAGACCATAATTGTGAGTGTTGAACGTAGATT
TAAGCATCCTGTGTATCATA

Product: 50S ribosomal protein L29

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 73

Protein sequence:

>73_residues
MNEFKKYSDLCNIELQGLRDLLLRYKKKLFNDRFQNSVDVVNSVKNFGCLKKKIAQISTEILQRTIKKNEEEK

Sequences:

>Translated_73_residues
MNEFKKYSDLCNIELQGLRDLLLRYKKKLFNDRFQNSVDVVNSVKNFGCLKKKIAQISTEILQRTIKKNEEEK
>Mature_73_residues
MNEFKKYSDLCNIELQGLRDLLLRYKKKLFNDRFQNSVDVVNSVKNFGCLKKKIAQISTEILQRTIKKNEEEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8696; Mature: 8696

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEFKKYSDLCNIELQGLRDLLLRYKKKLFNDRFQNSVDVVNSVKNFGCLKKKIAQISTE
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILQRTIKKNEEEK
HHHHHHHHCCCCC
>Mature Secondary Structure
MNEFKKYSDLCNIELQGLRDLLLRYKKKLFNDRFQNSVDVVNSVKNFGCLKKKIAQISTE
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILQRTIKKNEEEK
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA