| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183938
Identifier: 189183938
GI number: 189183938
Start: 1072058
End: 1072561
Strand: Reverse
Name: 189183938
Synonym: OTT_1031
Alternate gene names: NA
Gene position: 1072561-1072058 (Counterclockwise)
Preceding gene: 189183939
Following gene: 189183931
Centisome position: 53.39
GC content: 28.97
Gene sequence:
>504_bases ATGAATGTTTTGAAATCACTTTTACAACAGTGTTATGCTGTTATATTAGCATTCGTTGTATTATCTTCACCATCAATATG TACAGCAAATAATAATATAAAATTCAATACTTCCAAAGTTAGTATTGATACTTCGCCATTTTATCTAAAACTTTCATCTG GTATTTCTACTAACTATGGTATATTAGAAGCAGGGATTGGTTATAGACAAGCTCGGCACAGAATGGATGTAAAATTAGGA TTGATATGTTCTAATCACTTTATAGGTGATTTTATTCAAGTAAATTATTATTACAATATAATTGAAGGTAATAAAGCATC AATTTTTATTACAGAGGGACTACTACTATCTGCCAAGTGTTGTCTTAATATTGATCCAGAATTGGGAGTTGGTACAACAA TAAACTTATTAAGAGATATATATTTAGATATTGAATGTAGCATAATGGTTGACCATATATCAAGTCATATTCATACGCGT TTTGGATTGCGGTTTCACATTTAA
Upstream 100 bases:
>100_bases TAATTTTCAACTAATATGTTAATACTAATAAAGAAAATTGACTCAGAATATAATTAATATTAAACTTCATAAAAAATATT ATAATTAGATAGATACTGCT
Downstream 100 bases:
>100_bases TAACTAGCAAGTTTTATAGTTAGTAATGATTAGCTCATTAACAGGATTGCGTTGTTCATTGATTGAGTATACGACTGTAA CGGTATTGATATTAAAATCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MNVLKSLLQQCYAVILAFVVLSSPSICTANNNIKFNTSKVSIDTSPFYLKLSSGISTNYGILEAGIGYRQARHRMDVKLG LICSNHFIGDFIQVNYYYNIIEGNKASIFITEGLLLSAKCCLNIDPELGVGTTINLLRDIYLDIECSIMVDHISSHIHTR FGLRFHI
Sequences:
>Translated_167_residues MNVLKSLLQQCYAVILAFVVLSSPSICTANNNIKFNTSKVSIDTSPFYLKLSSGISTNYGILEAGIGYRQARHRMDVKLG LICSNHFIGDFIQVNYYYNIIEGNKASIFITEGLLLSAKCCLNIDPELGVGTTINLLRDIYLDIECSIMVDHISSHIHTR FGLRFHI >Mature_167_residues MNVLKSLLQQCYAVILAFVVLSSPSICTANNNIKFNTSKVSIDTSPFYLKLSSGISTNYGILEAGIGYRQARHRMDVKLG LICSNHFIGDFIQVNYYYNIIEGNKASIFITEGLLLSAKCCLNIDPELGVGTTINLLRDIYLDIECSIMVDHISSHIHTR FGLRFHI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18654; Mature: 18654
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVLKSLLQQCYAVILAFVVLSSPSICTANNNIKFNTSKVSIDTSPFYLKLSSGISTNYG CHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEECEEEEEECCCEEEEECCCCCCCCC ILEAGIGYRQARHRMDVKLGLICSNHFIGDFIQVNYYYNIIEGNKASIFITEGLLLSAKC EEECCCCHHHHHHHCCEEEEEEECCCCCCCEEEEEEEEEEEECCCEEEEEECCEEEEEEE CLNIDPELGVGTTINLLRDIYLDIECSIMVDHISSHIHTRFGLRFHI EEECCCCCCCCHHHHHHHHHHEEEEEEEEEEHHHHHHHHHEEEEEEC >Mature Secondary Structure MNVLKSLLQQCYAVILAFVVLSSPSICTANNNIKFNTSKVSIDTSPFYLKLSSGISTNYG CHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEECEEEEEECCCEEEEECCCCCCCCC ILEAGIGYRQARHRMDVKLGLICSNHFIGDFIQVNYYYNIIEGNKASIFITEGLLLSAKC EEECCCCHHHHHHHCCEEEEEEECCCCCCCEEEEEEEEEEEECCCEEEEEECCEEEEEEE CLNIDPELGVGTTINLLRDIYLDIECSIMVDHISSHIHTRFGLRFHI EEECCCCCCCCHHHHHHHHHHEEEEEEEEEEHHHHHHHHHEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA