Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

Click here to switch to the map view.

The map label for this gene is 189183938

Identifier: 189183938

GI number: 189183938

Start: 1072058

End: 1072561

Strand: Reverse

Name: 189183938

Synonym: OTT_1031

Alternate gene names: NA

Gene position: 1072561-1072058 (Counterclockwise)

Preceding gene: 189183939

Following gene: 189183931

Centisome position: 53.39

GC content: 28.97

Gene sequence:

>504_bases
ATGAATGTTTTGAAATCACTTTTACAACAGTGTTATGCTGTTATATTAGCATTCGTTGTATTATCTTCACCATCAATATG
TACAGCAAATAATAATATAAAATTCAATACTTCCAAAGTTAGTATTGATACTTCGCCATTTTATCTAAAACTTTCATCTG
GTATTTCTACTAACTATGGTATATTAGAAGCAGGGATTGGTTATAGACAAGCTCGGCACAGAATGGATGTAAAATTAGGA
TTGATATGTTCTAATCACTTTATAGGTGATTTTATTCAAGTAAATTATTATTACAATATAATTGAAGGTAATAAAGCATC
AATTTTTATTACAGAGGGACTACTACTATCTGCCAAGTGTTGTCTTAATATTGATCCAGAATTGGGAGTTGGTACAACAA
TAAACTTATTAAGAGATATATATTTAGATATTGAATGTAGCATAATGGTTGACCATATATCAAGTCATATTCATACGCGT
TTTGGATTGCGGTTTCACATTTAA

Upstream 100 bases:

>100_bases
TAATTTTCAACTAATATGTTAATACTAATAAAGAAAATTGACTCAGAATATAATTAATATTAAACTTCATAAAAAATATT
ATAATTAGATAGATACTGCT

Downstream 100 bases:

>100_bases
TAACTAGCAAGTTTTATAGTTAGTAATGATTAGCTCATTAACAGGATTGCGTTGTTCATTGATTGAGTATACGACTGTAA
CGGTATTGATATTAAAATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MNVLKSLLQQCYAVILAFVVLSSPSICTANNNIKFNTSKVSIDTSPFYLKLSSGISTNYGILEAGIGYRQARHRMDVKLG
LICSNHFIGDFIQVNYYYNIIEGNKASIFITEGLLLSAKCCLNIDPELGVGTTINLLRDIYLDIECSIMVDHISSHIHTR
FGLRFHI

Sequences:

>Translated_167_residues
MNVLKSLLQQCYAVILAFVVLSSPSICTANNNIKFNTSKVSIDTSPFYLKLSSGISTNYGILEAGIGYRQARHRMDVKLG
LICSNHFIGDFIQVNYYYNIIEGNKASIFITEGLLLSAKCCLNIDPELGVGTTINLLRDIYLDIECSIMVDHISSHIHTR
FGLRFHI
>Mature_167_residues
MNVLKSLLQQCYAVILAFVVLSSPSICTANNNIKFNTSKVSIDTSPFYLKLSSGISTNYGILEAGIGYRQARHRMDVKLG
LICSNHFIGDFIQVNYYYNIIEGNKASIFITEGLLLSAKCCLNIDPELGVGTTINLLRDIYLDIECSIMVDHISSHIHTR
FGLRFHI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18654; Mature: 18654

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVLKSLLQQCYAVILAFVVLSSPSICTANNNIKFNTSKVSIDTSPFYLKLSSGISTNYG
CHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEECEEEEEECCCEEEEECCCCCCCCC
ILEAGIGYRQARHRMDVKLGLICSNHFIGDFIQVNYYYNIIEGNKASIFITEGLLLSAKC
EEECCCCHHHHHHHCCEEEEEEECCCCCCCEEEEEEEEEEEECCCEEEEEECCEEEEEEE
CLNIDPELGVGTTINLLRDIYLDIECSIMVDHISSHIHTRFGLRFHI
EEECCCCCCCCHHHHHHHHHHEEEEEEEEEEHHHHHHHHHEEEEEEC
>Mature Secondary Structure
MNVLKSLLQQCYAVILAFVVLSSPSICTANNNIKFNTSKVSIDTSPFYLKLSSGISTNYG
CHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEECEEEEEECCCEEEEECCCCCCCCC
ILEAGIGYRQARHRMDVKLGLICSNHFIGDFIQVNYYYNIIEGNKASIFITEGLLLSAKC
EEECCCCHHHHHHHCCEEEEEEECCCCCCCEEEEEEEEEEEECCCEEEEEECCEEEEEEE
CLNIDPELGVGTTINLLRDIYLDIECSIMVDHISSHIHTRFGLRFHI
EEECCCCCCCCHHHHHHHHHHEEEEEEEEEEHHHHHHHHHEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA