Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183885

Identifier: 189183885

GI number: 189183885

Start: 1027765

End: 1028055

Strand: Reverse

Name: 189183885

Synonym: OTT_0978

Alternate gene names: NA

Gene position: 1028055-1027765 (Counterclockwise)

Preceding gene: 189183891

Following gene: 189183881

Centisome position: 51.17

GC content: 28.52

Gene sequence:

>291_bases
TTGTTTGGTGATAAAGCTTACATATCTAAAGAGTTATTTCATCAACTGCTGACCAATGGTCTACGTTTATTTACTAATCT
TCGTAAAGATATGAAAACATATTTATTGGACATACAAGATAAGAAGTTATTAAATAAACGTTCTTTAATTGAGTCTGTCT
TTAATGTACTAAAAAAACATATGCTTTTAGAGCATACTAGACACCGTTCTCCGAAAGAAGAAAAGTTAACTCAGATAGCT
GTAGACAATAGATCTATACAAGTAAGGTTATTATACTTTTTACTATGTTAA

Upstream 100 bases:

>100_bases
CTTATAATCAATAATAAAGGCGAAATAATGTCAGTTAAAATTACTAAAGGCAATAAAAGCGATCTATCTATAGCTTTAGT
TATTTTTGAAGGCTGGTAAA

Downstream 100 bases:

>100_bases
CCATGCAATAGCACTATAAGATAAAAAAAAATAATTCAATATTAGACCTCTTTCGAAACTGGTTAAGGTAGATCAAAATT
ATAAATGCCAGAGATCAAAT

Product: transposase

Products: NA

Alternate protein names: Transposase And Inactivated Derivative; ISPg3 Transposase

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MFGDKAYISKELFHQLLTNGLRLFTNLRKDMKTYLLDIQDKKLLNKRSLIESVFNVLKKHMLLEHTRHRSPKEEKLTQIA
VDNRSIQVRLLYFLLC

Sequences:

>Translated_96_residues
MFGDKAYISKELFHQLLTNGLRLFTNLRKDMKTYLLDIQDKKLLNKRSLIESVFNVLKKHMLLEHTRHRSPKEEKLTQIA
VDNRSIQVRLLYFLLC
>Mature_96_residues
MFGDKAYISKELFHQLLTNGLRLFTNLRKDMKTYLLDIQDKKLLNKRSLIESVFNVLKKHMLLEHTRHRSPKEEKLTQIA
VDNRSIQVRLLYFLLC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11503; Mature: 11503

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGDKAYISKELFHQLLTNGLRLFTNLRKDMKTYLLDIQDKKLLNKRSLIESVFNVLKKH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLLEHTRHRSPKEEKLTQIAVDNRSIQVRLLYFLLC
HHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHC
>Mature Secondary Structure
MFGDKAYISKELFHQLLTNGLRLFTNLRKDMKTYLLDIQDKKLLNKRSLIESVFNVLKKH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLLEHTRHRSPKEEKLTQIAVDNRSIQVRLLYFLLC
HHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA