Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183883

Identifier: 189183883

GI number: 189183883

Start: 1026090

End: 1026821

Strand: Direct

Name: 189183883

Synonym: OTT_0976

Alternate gene names: NA

Gene position: 1026090-1026821 (Clockwise)

Preceding gene: 189183882

Following gene: 189183884

Centisome position: 51.07

GC content: 27.19

Gene sequence:

>732_bases
ATGCTTATAAAACGGTTTATATCTTATTTAGCAATAAATAATAAAGTTACTTATGGTCAATATTTTGCATATGTTATTTT
AATGCTACTAATACTTCTTATAGAACTTTTATGTTTATACTATGTCGTTTTTTATTATCTATCTGTAGATATTCCAATAA
TAGAAAATGATAACCTTCCACATAAAATTAAGCCAAAGGTTGTTGGTGGAGTCAAGATATTAAACTCTGATAAAACTATA
TATGATAAAATAAAAAATGATGGTACTAGTGCAAATAATCAAGTTAAAATTTTACCTTTACCAGAGCAACCTTTAAAAAT
TAGAAAAAATGATGATGGCATCGTAAAAAAAGAGTCGCAGGAATCAAATAGCATAACTGATTCTTGTGCATACTCACAGC
AAGATTTGGAAATTATAACATTAGAGCAGTTTGATAATAGATTAAAATATTTGCTTTTGCATTCTCCAGCAAAAAAACGC
ACAACACAGAAATATAGGTTATATCTTGATTCTAGTTATAATGCTGATCTTGCAGAAGCAGCGTGGCAACAAATTTTTGA
AAGTAATAGTAAGATATTAAAAGGCTATAATTATATCATAGATGCAATGGTTGTTGATAATGATAAAGTGATATACAATA
TTTTGGCTGGTGAATTCTCTAATTTTAGTAGTGCATTTGCATTATGTAAAAAATTAATTTCTAACCAGCAAAATTGTTTA
GTGGTACAATAG

Upstream 100 bases:

>100_bases
CCGCTCGTCTTGCATTAGCTACAGCCGTTAGAGAGATTATTAGAGAAGGATTAAAGATTATTGGAATTACTTGTGTTGAA
GTAATGTAAGAATCACAACT

Downstream 100 bases:

>100_bases
ACTTCTTTCGAAACTGAACAATTATGTAGAATGATGTTATAAATATGTGATTTGAGGTAATAATGAAATTCGATCAGATT
AAAGAGTTAGAGGATGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MLIKRFISYLAINNKVTYGQYFAYVILMLLILLIELLCLYYVVFYYLSVDIPIIENDNLPHKIKPKVVGGVKILNSDKTI
YDKIKNDGTSANNQVKILPLPEQPLKIRKNDDGIVKKESQESNSITDSCAYSQQDLEIITLEQFDNRLKYLLLHSPAKKR
TTQKYRLYLDSSYNADLAEAAWQQIFESNSKILKGYNYIIDAMVVDNDKVIYNILAGEFSNFSSAFALCKKLISNQQNCL
VVQ

Sequences:

>Translated_243_residues
MLIKRFISYLAINNKVTYGQYFAYVILMLLILLIELLCLYYVVFYYLSVDIPIIENDNLPHKIKPKVVGGVKILNSDKTI
YDKIKNDGTSANNQVKILPLPEQPLKIRKNDDGIVKKESQESNSITDSCAYSQQDLEIITLEQFDNRLKYLLLHSPAKKR
TTQKYRLYLDSSYNADLAEAAWQQIFESNSKILKGYNYIIDAMVVDNDKVIYNILAGEFSNFSSAFALCKKLISNQQNCL
VVQ
>Mature_243_residues
MLIKRFISYLAINNKVTYGQYFAYVILMLLILLIELLCLYYVVFYYLSVDIPIIENDNLPHKIKPKVVGGVKILNSDKTI
YDKIKNDGTSANNQVKILPLPEQPLKIRKNDDGIVKKESQESNSITDSCAYSQQDLEIITLEQFDNRLKYLLLHSPAKKR
TTQKYRLYLDSSYNADLAEAAWQQIFESNSKILKGYNYIIDAMVVDNDKVIYNILAGEFSNFSSAFALCKKLISNQQNCL
VVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007730 [H]

Pfam domain/function: PF05036 SPOR [H]

EC number: NA

Molecular weight: Translated: 27919; Mature: 27919

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIKRFISYLAINNKVTYGQYFAYVILMLLILLIELLCLYYVVFYYLSVDIPIIENDNLP
CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCC
HKIKPKVVGGVKILNSDKTIYDKIKNDGTSANNQVKILPLPEQPLKIRKNDDGIVKKESQ
CCCCCCEECCEEEECCCCHHHHHHHCCCCCCCCEEEEEECCCCCCEEECCCCCCEECCCC
ESNSITDSCAYSQQDLEIITLEQFDNRLKYLLLHSPAKKRTTQKYRLYLDSSYNADLAEA
CCCCCHHHHHCCCCCCEEEEHHHHHCHHEEEEEECCHHHHCCEEEEEEECCCCCCHHHHH
AWQQIFESNSKILKGYNYIIDAMVVDNDKVIYNILAGEFSNFSSAFALCKKLISNQQNCL
HHHHHHHCCCHHHHHHHEEEEEEEECCCCEEEEEHHCCCCCHHHHHHHHHHHHCCCCCEE
VVQ
EEC
>Mature Secondary Structure
MLIKRFISYLAINNKVTYGQYFAYVILMLLILLIELLCLYYVVFYYLSVDIPIIENDNLP
CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCC
HKIKPKVVGGVKILNSDKTIYDKIKNDGTSANNQVKILPLPEQPLKIRKNDDGIVKKESQ
CCCCCCEECCEEEECCCCHHHHHHHCCCCCCCCEEEEEECCCCCCEEECCCCCCEECCCC
ESNSITDSCAYSQQDLEIITLEQFDNRLKYLLLHSPAKKRTTQKYRLYLDSSYNADLAEA
CCCCCHHHHHCCCCCCEEEEHHHHHCHHEEEEEECCHHHHCCEEEEEEECCCCCCHHHHH
AWQQIFESNSKILKGYNYIIDAMVVDNDKVIYNILAGEFSNFSSAFALCKKLISNQQNCL
HHHHHHHCCCHHHHHHHEEEEEEEECCCCEEEEEHHCCCCCHHHHHHHHHHHHCCCCCEE
VVQ
EEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]