| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is dut [H]
Identifier: 189183873
GI number: 189183873
Start: 1013531
End: 1013977
Strand: Direct
Name: dut [H]
Synonym: OTT_0966
Alternate gene names: 189183873
Gene position: 1013531-1013977 (Clockwise)
Preceding gene: 189183872
Following gene: 189183874
Centisome position: 50.45
GC content: 36.69
Gene sequence:
>447_bases ATGAAAGTAAAAATTAAGCAAATTTATCAATTTGAGGGAACATCATCTCTGCCTGCGTATTCTACTAATGGCAGTGCTGG TATGGACTTGTATGCTGCGATAGCTAGTCCTATGATAATTAAGCCTCATGAAACTGCTCTTGTACCTGCTGGTATTGCTA TTTCCTTGCCTTATGGATATGAAGCGCAAATACGTTCTAGATCAGGGCTTGCTAGTAAGTTTGGTGTAATAGTTTTAAAC TCTCCAGGTACTATTGACTCCGATTATCGAGGAGAATTGAAGATTATTATGATCAATTTAGGTCAAAAAGATTTTCAGCT GACTCCAGCTATGCGTATTGCTCAAATGGTAATAGCTAAATATGAGGTTATTAGTTGGGAAATTGTAGATGATTTAGATG AAACAGAAAGAGGTGAAAAAGGGTTTGGTTCTAGTGGCTTAAAGTAA
Upstream 100 bases:
>100_bases TGCTCTCTATAGTTTGACATATTTTTTATATTGAACTCGTGCTAATTAAGCTTTGATAAAGTTTATTGACTAAAAGATAA GGTAGTGGTATAAAGGAGTA
Downstream 100 bases:
>100_bases TAAATACTGCTGTTGTATAGCTAATTTGGCCAAAGTTTTTTCAATCGCAATATTAATTTGTTAGAAGTTAGTAGTTTATC TAGGTAATGATTAAATGCAT
Product: deoxyuridine 5'-triphosphate nucleotidohydrolase
Products: NA
Alternate protein names: dUTPase; dUTP pyrophosphatase [H]
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MKVKIKQIYQFEGTSSLPAYSTNGSAGMDLYAAIASPMIIKPHETALVPAGIAISLPYGYEAQIRSRSGLASKFGVIVLN SPGTIDSDYRGELKIIMINLGQKDFQLTPAMRIAQMVIAKYEVISWEIVDDLDETERGEKGFGSSGLK
Sequences:
>Translated_148_residues MKVKIKQIYQFEGTSSLPAYSTNGSAGMDLYAAIASPMIIKPHETALVPAGIAISLPYGYEAQIRSRSGLASKFGVIVLN SPGTIDSDYRGELKIIMINLGQKDFQLTPAMRIAQMVIAKYEVISWEIVDDLDETERGEKGFGSSGLK >Mature_148_residues MKVKIKQIYQFEGTSSLPAYSTNGSAGMDLYAAIASPMIIKPHETALVPAGIAISLPYGYEAQIRSRSGLASKFGVIVLN SPGTIDSDYRGELKIIMINLGQKDFQLTPAMRIAQMVIAKYEVISWEIVDDLDETERGEKGFGSSGLK
Specific function: This enzyme is involved in nucleotide metabolism:it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA [H]
COG id: COG0756
COG function: function code F; dUTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dUTPase family [H]
Homologues:
Organism=Homo sapiens, GI70906444, Length=132, Percent_Identity=38.6363636363636, Blast_Score=89, Evalue=1e-18, Organism=Homo sapiens, GI4503423, Length=132, Percent_Identity=38.6363636363636, Blast_Score=89, Evalue=1e-18, Organism=Homo sapiens, GI70906441, Length=146, Percent_Identity=35.6164383561644, Blast_Score=88, Evalue=3e-18, Organism=Escherichia coli, GI1790071, Length=131, Percent_Identity=44.2748091603053, Blast_Score=110, Evalue=3e-26, Organism=Caenorhabditis elegans, GI71988561, Length=140, Percent_Identity=38.5714285714286, Blast_Score=103, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6319729, Length=144, Percent_Identity=32.6388888888889, Blast_Score=82, Evalue=3e-17, Organism=Drosophila melanogaster, GI24583610, Length=131, Percent_Identity=34.3511450381679, Blast_Score=80, Evalue=6e-16, Organism=Drosophila melanogaster, GI19921126, Length=131, Percent_Identity=34.3511450381679, Blast_Score=79, Evalue=8e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008180 - InterPro: IPR008181 [H]
Pfam domain/function: PF00692 dUTPase [H]
EC number: =3.6.1.23 [H]
Molecular weight: Translated: 16092; Mature: 16092
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVKIKQIYQFEGTSSLPAYSTNGSAGMDLYAAIASPMIIKPHETALVPAGIAISLPYGY CCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCEEECCCCCEEECCCEEEECCCCC EAQIRSRSGLASKFGVIVLNSPGTIDSDYRGELKIIMINLGQKDFQLTPAMRIAQMVIAK CEEECCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCEEECHHHHHHHHHHHH YEVISWEIVDDLDETERGEKGFGSSGLK HHHEEEEECCCCCHHCCCCCCCCCCCCC >Mature Secondary Structure MKVKIKQIYQFEGTSSLPAYSTNGSAGMDLYAAIASPMIIKPHETALVPAGIAISLPYGY CCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCEEECCCCCEEECCCEEEECCCCC EAQIRSRSGLASKFGVIVLNSPGTIDSDYRGELKIIMINLGQKDFQLTPAMRIAQMVIAK CEEECCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCEEECHHHHHHHHHHHH YEVISWEIVDDLDETERGEKGFGSSGLK HHHEEEEECCCCCHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA