Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is ubiG [H]

Identifier: 189183833

GI number: 189183833

Start: 966559

End: 967299

Strand: Direct

Name: ubiG [H]

Synonym: OTT_0926

Alternate gene names: 189183833

Gene position: 966559-967299 (Clockwise)

Preceding gene: 189183831

Following gene: 189183836

Centisome position: 48.11

GC content: 28.61

Gene sequence:

>741_bases
ATGTATAATAACTCAACAATAGATCAAGAGGAAATAGAAAAATTCAATACTATAGCCAATGAATGGTGGAATCCTAATGG
CAAGTTTAAGCAATTACATTTAATGAATCCAGCCAGAATCAGATTTATTAAGCAAAAAATACTATTACATTATAATTTAA
TTGATAGTATAACAAGGCCTTTTCATGGGCTAAAAATTGCTGATATCGGTTGCGGAGGTGGAATAACATCAATACCAATG
GCTAAGCTAGGCGCTACAGTTACAGGTATTGATGCTAGCAGTAAGAATATAGCAGTCGCAAAAATGTATGCTAATAAAAT
AGGAGCGCAAGTTAATTACATTCATAGTTCGATTGAAGAGTATGTAAAAATTAGCAATGAAAAATATGACGTAGTTTTAT
GCTTAGAAGTGATTGAACATGTAAGTAATATTCAGAGTTTTATTTTATATTTAAGTAAAATTTTAAAGCATGGTGGCATG
GCTATCATCTCAACTATTAACAAAACTTTGAAATCTTATGTTTTTGCTATAGGTTTAGCTGAATATTTGTTAGGATATCT
ACCAATAGGTACTCATGATTTTAATAAATTTTTGAAACCATCTACTATTAATAATATTTTACTTTCACATAACATGACTT
TAAAAGAAATTCAAGGATTATCATATAATCCTATATTGCAACAATGGCGCTTAACTAATGATATAAGCGTTAATTATATC
ATGTATATTACTGCAATTTAA

Upstream 100 bases:

>100_bases
GTCAGTATATAATATTTACCGTATTTTTTAAATTAATATCACTTTAATATAATTGATTCAACTGCATATTCCATATATCA
CTTTTTGAATAAAGCTTCTT

Downstream 100 bases:

>100_bases
ATTTTAAGCATCTGCAATAACTATTAAAATCATAATATTTATTCTCAAGTATTAAGCCACTTTTGAAGCAAAGCGCACAT
ACCATTTCTGCTTTGTTATA

Product: 3-demethylubiquinone-9 3-methyltransferase

Products: NA

Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase [H]

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MYNNSTIDQEEIEKFNTIANEWWNPNGKFKQLHLMNPARIRFIKQKILLHYNLIDSITRPFHGLKIADIGCGGGITSIPM
AKLGATVTGIDASSKNIAVAKMYANKIGAQVNYIHSSIEEYVKISNEKYDVVLCLEVIEHVSNIQSFILYLSKILKHGGM
AIISTINKTLKSYVFAIGLAEYLLGYLPIGTHDFNKFLKPSTINNILLSHNMTLKEIQGLSYNPILQQWRLTNDISVNYI
MYITAI

Sequences:

>Translated_246_residues
MYNNSTIDQEEIEKFNTIANEWWNPNGKFKQLHLMNPARIRFIKQKILLHYNLIDSITRPFHGLKIADIGCGGGITSIPM
AKLGATVTGIDASSKNIAVAKMYANKIGAQVNYIHSSIEEYVKISNEKYDVVLCLEVIEHVSNIQSFILYLSKILKHGGM
AIISTINKTLKSYVFAIGLAEYLLGYLPIGTHDFNKFLKPSTINNILLSHNMTLKEIQGLSYNPILQQWRLTNDISVNYI
MYITAI
>Mature_246_residues
MYNNSTIDQEEIEKFNTIANEWWNPNGKFKQLHLMNPARIRFIKQKILLHYNLIDSITRPFHGLKIADIGCGGGITSIPM
AKLGATVTGIDASSKNIAVAKMYANKIGAQVNYIHSSIEEYVKISNEKYDVVLCLEVIEHVSNIQSFILYLSKILKHGGM
AIISTINKTLKSYVFAIGLAEYLLGYLPIGTHDFNKFLKPSTINNILLSHNMTLKEIQGLSYNPILQQWRLTNDISVNYI
MYITAI

Specific function: Ubiquinone biosynthesis. [C]

COG id: COG2227

COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family [H]

Homologues:

Organism=Homo sapiens, GI118600965, Length=248, Percent_Identity=35.4838709677419, Blast_Score=176, Evalue=1e-44,
Organism=Escherichia coli, GI1788564, Length=239, Percent_Identity=38.0753138075314, Blast_Score=192, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI115533050, Length=242, Percent_Identity=31.404958677686, Blast_Score=138, Evalue=2e-33,
Organism=Saccharomyces cerevisiae, GI6324476, Length=280, Percent_Identity=27.5, Blast_Score=98, Evalue=1e-21,
Organism=Drosophila melanogaster, GI281365311, Length=240, Percent_Identity=32.5, Blast_Score=135, Evalue=2e-32,
Organism=Drosophila melanogaster, GI24585589, Length=206, Percent_Identity=34.4660194174757, Blast_Score=127, Evalue=7e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216
- InterPro:   IPR010233 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: =2.1.1.64 [H]

Molecular weight: Translated: 27798; Mature: 27798

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYNNSTIDQEEIEKFNTIANEWWNPNGKFKQLHLMNPARIRFIKQKILLHYNLIDSITRP
CCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCC
FHGLKIADIGCGGGITSIPMAKLGATVTGIDASSKNIAVAKMYANKIGAQVNYIHSSIEE
CCCCEEEEECCCCCCCCCCHHHHCCEEEECCCCCCCEEHHHHHHHHHCCHHHHHHHHHHH
YVKISNEKYDVVLCLEVIEHVSNIQSFILYLSKILKHGGMAIISTINKTLKSYVFAIGLA
HHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
EYLLGYLPIGTHDFNKFLKPSTINNILLSHNMTLKEIQGLSYNPILQQWRLTNDISVNYI
HHHHHHCCCCCHHHHHHCCCCHHHHHHHHCCCHHHHHCCCCCCHHHHHHHCCCCCCEEEE
MYITAI
EEEEEC
>Mature Secondary Structure
MYNNSTIDQEEIEKFNTIANEWWNPNGKFKQLHLMNPARIRFIKQKILLHYNLIDSITRP
CCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCC
FHGLKIADIGCGGGITSIPMAKLGATVTGIDASSKNIAVAKMYANKIGAQVNYIHSSIEE
CCCCEEEEECCCCCCCCCCHHHHCCEEEECCCCCCCEEHHHHHHHHHCCHHHHHHHHHHH
YVKISNEKYDVVLCLEVIEHVSNIQSFILYLSKILKHGGMAIISTINKTLKSYVFAIGLA
HHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
EYLLGYLPIGTHDFNKFLKPSTINNILLSHNMTLKEIQGLSYNPILQQWRLTNDISVNYI
HHHHHHCCCCCHHHHHHCCCCHHHHHHHHCCCHHHHHCCCCCCHHHHHHHCCCCCCEEEE
MYITAI
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA