Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183828

Identifier: 189183828

GI number: 189183828

Start: 963611

End: 963967

Strand: Direct

Name: 189183828

Synonym: OTT_0921

Alternate gene names: NA

Gene position: 963611-963967 (Clockwise)

Preceding gene: 189183827

Following gene: 189183829

Centisome position: 47.97

GC content: 33.33

Gene sequence:

>357_bases
ATGAAGTTATTAAGTTTTAAGCAAAATTATTATTTGAAACCATTATTGATATTATGTTTTTTAATGCTTATTCTGTCTAC
TAGTGTTGTTAGCGCTCAAGCAGCAGGAGATAGTGGTGATCCAATAGGTGAGAAGTTATGTAATATAGTAGGAATTTTGA
ACGGAAAAACAACTAAAGCATTATGTTTGGTTGCAATCGTTATCTTAGGGATAACAACATTTATGGGAAAGGTAAATACG
AGTACAGCTGTAATTACTGTTTGCGCCATTGTTGTTGTAACTCAAGCTAATAAGGTATATGAGTTTATTGCTGGTAAGGA
TGCTAATGGCACTCAATGCGAAAAATCCAGCAGCTAA

Upstream 100 bases:

>100_bases
TAAATCACTAGGGTGTCATATGTTTATTATAAGTCTTTTAAACAAAGAGAATATAATAGGTGGTTTGTTACTTTATTTGA
ATGTAATTTAGGAGAAAATT

Downstream 100 bases:

>100_bases
CCACAAAGATATAATATGCTAGCTGTTGCTACATTTGAATGTAATTTAGGAGAAAAAATTATGAGGTTATTAAGTTTTAA
GCAAAGTTGTTATTTGAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MKLLSFKQNYYLKPLLILCFLMLILSTSVVSAQAAGDSGDPIGEKLCNIVGILNGKTTKALCLVAIVILGITTFMGKVNT
STAVITVCAIVVVTQANKVYEFIAGKDANGTQCEKSSS

Sequences:

>Translated_118_residues
MKLLSFKQNYYLKPLLILCFLMLILSTSVVSAQAAGDSGDPIGEKLCNIVGILNGKTTKALCLVAIVILGITTFMGKVNT
STAVITVCAIVVVTQANKVYEFIAGKDANGTQCEKSSS
>Mature_118_residues
MKLLSFKQNYYLKPLLILCFLMLILSTSVVSAQAAGDSGDPIGEKLCNIVGILNGKTTKALCLVAIVILGITTFMGKVNT
STAVITVCAIVVVTQANKVYEFIAGKDANGTQCEKSSS

Specific function: Unknown

COG id: COG3838

COG function: function code U; Type IV secretory pathway, VirB2 components (pilins)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12449; Mature: 12449

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLSFKQNYYLKPLLILCFLMLILSTSVVSAQAAGDSGDPIGEKLCNIVGILNGKTTKA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHH
LCLVAIVILGITTFMGKVNTSTAVITVCAIVVVTQANKVYEFIAGKDANGTQCEKSSS
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKLLSFKQNYYLKPLLILCFLMLILSTSVVSAQAAGDSGDPIGEKLCNIVGILNGKTTKA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHH
LCLVAIVILGITTFMGKVNTSTAVITVCAIVVVTQANKVYEFIAGKDANGTQCEKSSS
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA