| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is tlc5 [H]
Identifier: 189183827
GI number: 189183827
Start: 961866
End: 963365
Strand: Direct
Name: tlc5 [H]
Synonym: OTT_0920
Alternate gene names: 189183827
Gene position: 961866-963365 (Clockwise)
Preceding gene: 189183823
Following gene: 189183828
Centisome position: 47.88
GC content: 29.07
Gene sequence:
>1500_bases ATGGCTATCTCCAAGATAAAGCTTTTTTTTTCTAGATTGGCTATTCATTTATGGCCTGTGCACCGCCATGAGCTGCAAAA ATTTATTCCTACATCTCTTTTAATGTTTTTCATACTTTTTAATCAAAATATTCTGCGTATTCTTAAAGATAGCATTGTAA TACCAGAAATAAGTGCTGAAATTACAAGTTTTATAAAAGCATATTGTGTTACACCAACAGCAGCATTGCTTGTAATACTA TATGCATATATGGTTAATAATTTAAATTATGAAAAGATATACCGGTATCTAACATTAGTATTTTTATCATTTTTTCTTTG TTTTGCTTTTTGGTTTTATCCTAAAGCAAGTATATTTCACCTAAACATTGAAAAAGTTAACGAGTTAATGTTAATTTATC CCCATTTTAAATGGTATATAGCTCTTGCTGCTAATTGGAGTTACATAATTTTTTATGTATTATCAGAACTATGGCCTAAT ATATTCTATGCTTTATTGTTTTGGCAATTAGTTAATGAAGTTACAACTACTGAAGAAGCTAAACGTTTCTATATGTTGTT TTCATTATTTGGCAATTCTTCTTTAATAGTGGTAGGATTAATTGTAATGCATCTAGCATCTAGCAACTCTATACTTCAGG GGTATTTTTTAGGAGTATCAAATAACATATTACTTGTACAGTCTTCAATAGCTATAATGGCAGCTAGCTCTATATGCTCA ATTTTTTTAGTACGATTTATTTATTATAATGCTATACCAAAAACACAGTTACAGCATAAAATGCAGCATGAAAGAGAAGC GAGGCCAAAAATGAATTTACGAGAAAGCTTCAAGTATATTATTTCATCAAGATATTTATGGCTTATTTTAATTTGTACTG CTTCTTTTGGTTTTAGTATGAATTTAGTTGAAGGAATTTGGAAAGCTCAAGTTAAAAACTTATACTCTACTACTAATACA TATGCTGAGTTTAATGGTTCTTGTGTTGCATGGACAGGAGTAGTAATAATTTTCTTAACAATTATTGGCAATAGTGTACT ACGCTACTATAGTTGGTTTGTAGTTGCTATTATTACTCCTATTATTATTATTACTACTGGTACAATATTTTTTATTTTTG TAGTCTTTGATAAAGACATATTATTATGGGTTAATATGCTAAGTTCCGCTCCACCTATTGCTATAGCTGTAATGGTTGGC GCGATTCAAAATGTTATTGCTAAAGGAGCTAAATACTCAATATGGGATACATCAAAGGAAATGTTATATATTCCGCTTGA TAAAGAGCTGAAAACTAAAGGAAAAGCTGCTGTTGATATAATTAGTGCTAAAGTTGGAAAATCTTCAGGCGGATTAATAC AGTCTTTTTTATTTATACTATTTCCAACAGCAAGCTATATTTCACTTTCTCCAGTTTTAATGCTAATTTTTATTGTAGTA TGTATAGTATGGATTTTTGCTGTTAAGCAAATTTATTCAGAATATAAAAAAATAGTGTAA
Upstream 100 bases:
>100_bases ATTAATCTTAATTAACTACAATTCAGTTCTCATTCTCAGAATGCAAAAATATAAGGTATTAGCATTTGTTTGAAATAAGC TGTAGGAGTAAATCTTAAGT
Downstream 100 bases:
>100_bases TTTATTGATTATTAAATATAGCAAAAGAGATACATTTGTTAATCGTATGTAAGGTACAAATAACGAATATTATAAGTTTA TTGATTAAACAAAAAATTAA
Product: ADP,ATP carrier protein homolog
Products: NA
Alternate protein names: ADP/ATP translocase 5 [H]
Number of amino acids: Translated: 499; Mature: 498
Protein sequence:
>499_residues MAISKIKLFFSRLAIHLWPVHRHELQKFIPTSLLMFFILFNQNILRILKDSIVIPEISAEITSFIKAYCVTPTAALLVIL YAYMVNNLNYEKIYRYLTLVFLSFFLCFAFWFYPKASIFHLNIEKVNELMLIYPHFKWYIALAANWSYIIFYVLSELWPN IFYALLFWQLVNEVTTTEEAKRFYMLFSLFGNSSLIVVGLIVMHLASSNSILQGYFLGVSNNILLVQSSIAIMAASSICS IFLVRFIYYNAIPKTQLQHKMQHEREARPKMNLRESFKYIISSRYLWLILICTASFGFSMNLVEGIWKAQVKNLYSTTNT YAEFNGSCVAWTGVVIIFLTIIGNSVLRYYSWFVVAIITPIIIITTGTIFFIFVVFDKDILLWVNMLSSAPPIAIAVMVG AIQNVIAKGAKYSIWDTSKEMLYIPLDKELKTKGKAAVDIISAKVGKSSGGLIQSFLFILFPTASYISLSPVLMLIFIVV CIVWIFAVKQIYSEYKKIV
Sequences:
>Translated_499_residues MAISKIKLFFSRLAIHLWPVHRHELQKFIPTSLLMFFILFNQNILRILKDSIVIPEISAEITSFIKAYCVTPTAALLVIL YAYMVNNLNYEKIYRYLTLVFLSFFLCFAFWFYPKASIFHLNIEKVNELMLIYPHFKWYIALAANWSYIIFYVLSELWPN IFYALLFWQLVNEVTTTEEAKRFYMLFSLFGNSSLIVVGLIVMHLASSNSILQGYFLGVSNNILLVQSSIAIMAASSICS IFLVRFIYYNAIPKTQLQHKMQHEREARPKMNLRESFKYIISSRYLWLILICTASFGFSMNLVEGIWKAQVKNLYSTTNT YAEFNGSCVAWTGVVIIFLTIIGNSVLRYYSWFVVAIITPIIIITTGTIFFIFVVFDKDILLWVNMLSSAPPIAIAVMVG AIQNVIAKGAKYSIWDTSKEMLYIPLDKELKTKGKAAVDIISAKVGKSSGGLIQSFLFILFPTASYISLSPVLMLIFIVV CIVWIFAVKQIYSEYKKIV >Mature_498_residues AISKIKLFFSRLAIHLWPVHRHELQKFIPTSLLMFFILFNQNILRILKDSIVIPEISAEITSFIKAYCVTPTAALLVILY AYMVNNLNYEKIYRYLTLVFLSFFLCFAFWFYPKASIFHLNIEKVNELMLIYPHFKWYIALAANWSYIIFYVLSELWPNI FYALLFWQLVNEVTTTEEAKRFYMLFSLFGNSSLIVVGLIVMHLASSNSILQGYFLGVSNNILLVQSSIAIMAASSICSI FLVRFIYYNAIPKTQLQHKMQHEREARPKMNLRESFKYIISSRYLWLILICTASFGFSMNLVEGIWKAQVKNLYSTTNTY AEFNGSCVAWTGVVIIFLTIIGNSVLRYYSWFVVAIITPIIIITTGTIFFIFVVFDKDILLWVNMLSSAPPIAIAVMVGA IQNVIAKGAKYSIWDTSKEMLYIPLDKELKTKGKAAVDIISAKVGKSSGGLIQSFLFILFPTASYISLSPVLMLIFIVVC IVWIFAVKQIYSEYKKIV
Specific function: Provides the rickettsial cell with host ATP in exchange for rickettsial ADP. This is an obligate exchange system. This energy acquiring activity is an important component of rickettsial parasitism [H]
COG id: COG3202
COG function: function code C; ATP/ADP translocase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ADP/ATP translocase tlc family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004667 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57332; Mature: 57201
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: PS00659 GLYCOSYL_HYDROL_F5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAISKIKLFFSRLAIHLWPVHRHELQKFIPTSLLMFFILFNQNILRILKDSIVIPEISAE CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH ITSFIKAYCVTPTAALLVILYAYMVNNLNYEKIYRYLTLVFLSFFLCFAFWFYPKASIFH HHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE LNIEKVNELMLIYPHFKWYIALAANWSYIIFYVLSELWPNIFYALLFWQLVNEVTTTEEA EEHHHHCCEEEEEECCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KRFYMLFSLFGNSSLIVVGLIVMHLASSNSILQGYFLGVSNNILLVQSSIAIMAASSICS HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHH IFLVRFIYYNAIPKTQLQHKMQHEREARPKMNLRESFKYIISSRYLWLILICTASFGFSM HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCH NLVEGIWKAQVKNLYSTTNTYAEFNGSCVAWTGVVIIFLTIIGNSVLRYYSWFVVAIITP HHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIIITTGTIFFIFVVFDKDILLWVNMLSSAPPIAIAVMVGAIQNVIAKGAKYSIWDTSKE HHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCC MLYIPLDKELKTKGKAAVDIISAKVGKSSGGLIQSFLFILFPTASYISLSPVLMLIFIVV EEEEECCHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH CIVWIFAVKQIYSEYKKIV HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AISKIKLFFSRLAIHLWPVHRHELQKFIPTSLLMFFILFNQNILRILKDSIVIPEISAE CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH ITSFIKAYCVTPTAALLVILYAYMVNNLNYEKIYRYLTLVFLSFFLCFAFWFYPKASIFH HHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE LNIEKVNELMLIYPHFKWYIALAANWSYIIFYVLSELWPNIFYALLFWQLVNEVTTTEEA EEHHHHCCEEEEEECCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KRFYMLFSLFGNSSLIVVGLIVMHLASSNSILQGYFLGVSNNILLVQSSIAIMAASSICS HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHH IFLVRFIYYNAIPKTQLQHKMQHEREARPKMNLRESFKYIISSRYLWLILICTASFGFSM HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCH NLVEGIWKAQVKNLYSTTNTYAEFNGSCVAWTGVVIIFLTIIGNSVLRYYSWFVVAIITP HHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIIITTGTIFFIFVVFDKDILLWVNMLSSAPPIAIAVMVGAIQNVIAKGAKYSIWDTSKE HHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCC MLYIPLDKELKTKGKAAVDIISAKVGKSSGGLIQSFLFILFPTASYISLSPVLMLIFIVV EEEEECCHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH CIVWIFAVKQIYSEYKKIV HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA