| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183808
Identifier: 189183808
GI number: 189183808
Start: 941208
End: 941753
Strand: Reverse
Name: 189183808
Synonym: OTT_0901
Alternate gene names: NA
Gene position: 941753-941208 (Counterclockwise)
Preceding gene: 189183809
Following gene: 189183807
Centisome position: 46.88
GC content: 25.46
Gene sequence:
>546_bases ATGAATGAAAATTGTTACTACAATATTACTAAGATACATGAGCAACAACTGTTATCTATAGCAGAAATTAAAACTTACCT ACGTATAAATAGTAGCAACTTTCATAATGAGATGGAAAACACAATCTTGAATACAATAACTATAGCTGCTATTAGCTATG CAGAAAAATTCCTGCGCATTAATTTAATTGAAAAAAATGTTTGCTATATAATTGTAAAGGTTAAAAGTCTTAAGATTTTG TTACCAATTGTGCCAGCAAAAAAAATTATTTCTGTTAAAAATCATAGTAATAATTCTATTATTGATCAACAATTTTATCA GTTAAGTTGCAATAGCACTAATATTCAATTTTCAAGCAATGACTTTATTAATCAGTCCTTTAAAATTGAATACACTGTTT TAACTACAGATCCTTCAATTATTAATGCGATTAAACCTGGGATATTACTACATATAAGTGAGTTATATGATCGAAGAATT ATAGAACCTAAAGTATTTGCCAGTATAAACCAAATATATCAAAGCTATAAAAAAGTATTAATATAA
Upstream 100 bases:
>100_bases TGGAGGCGATATTGTTGTTTCTAAGGCAATAAAAATTTTGCAATTTAGTACTAAAACTAAACAGTAATAAAATAGCGTTA GGCAAAAAAGTTGAATTATT
Downstream 100 bases:
>100_bases AATGAGTATCATTAATTTTAGTAGTAGACTAAAGCATAATATCATTTTTTTTGCAAAAGAAAGTAATACTAGTAGATGGA TTGAAGTTTTATCATGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MNENCYYNITKIHEQQLLSIAEIKTYLRINSSNFHNEMENTILNTITIAAISYAEKFLRINLIEKNVCYIIVKVKSLKIL LPIVPAKKIISVKNHSNNSIIDQQFYQLSCNSTNIQFSSNDFINQSFKIEYTVLTTDPSIINAIKPGILLHISELYDRRI IEPKVFASINQIYQSYKKVLI
Sequences:
>Translated_181_residues MNENCYYNITKIHEQQLLSIAEIKTYLRINSSNFHNEMENTILNTITIAAISYAEKFLRINLIEKNVCYIIVKVKSLKIL LPIVPAKKIISVKNHSNNSIIDQQFYQLSCNSTNIQFSSNDFINQSFKIEYTVLTTDPSIINAIKPGILLHISELYDRRI IEPKVFASINQIYQSYKKVLI >Mature_181_residues MNENCYYNITKIHEQQLLSIAEIKTYLRINSSNFHNEMENTILNTITIAAISYAEKFLRINLIEKNVCYIIVKVKSLKIL LPIVPAKKIISVKNHSNNSIIDQQFYQLSCNSTNIQFSSNDFINQSFKIEYTVLTTDPSIINAIKPGILLHISELYDRRI IEPKVFASINQIYQSYKKVLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20963; Mature: 20963
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNENCYYNITKIHEQQLLSIAEIKTYLRINSSNFHNEMENTILNTITIAAISYAEKFLRI CCCCEEEEHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHEE NLIEKNVCYIIVKVKSLKILLPIVPAKKIISVKNHSNNSIIDQQFYQLSCNSTNIQFSSN EEEECCEEEEEEEEECEEEEEEECCHHHEEEEECCCCCCCHHHHHEEEECCCCEEEECCC DFINQSFKIEYTVLTTDPSIINAIKPGILLHISELYDRRIIEPKVFASINQIYQSYKKVL CCCCCEEEEEEEEEECCCHHHHHCCCCCEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHC I C >Mature Secondary Structure MNENCYYNITKIHEQQLLSIAEIKTYLRINSSNFHNEMENTILNTITIAAISYAEKFLRI CCCCEEEEHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHEE NLIEKNVCYIIVKVKSLKILLPIVPAKKIISVKNHSNNSIIDQQFYQLSCNSTNIQFSSN EEEECCEEEEEEEEECEEEEEEECCHHHEEEEECCCCCCCHHHHHEEEECCCCEEEECCC DFINQSFKIEYTVLTTDPSIINAIKPGILLHISELYDRRIIEPKVFASINQIYQSYKKVL CCCCCEEEEEEEEEECCCHHHHHCCCCCEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHC I C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA