| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183796
Identifier: 189183796
GI number: 189183796
Start: 931695
End: 932993
Strand: Reverse
Name: 189183796
Synonym: OTT_0889
Alternate gene names: NA
Gene position: 932993-931695 (Counterclockwise)
Preceding gene: 189183798
Following gene: 189183795
Centisome position: 46.44
GC content: 30.25
Gene sequence:
>1299_bases TTGCGTAATGTTCCATGTATAAAACTTCTAAAAAATTTTCAGCGTTTCACTGAAAAAGAAAAAAAAGGAGAAAAAATTAT TGATCTAACCCAAAAAATTTTTCGCTCCAACCTGAAAGAAATTTCAGGTGAACCTGAAAAAAGTTTCAGGTACATATATA GATATAATAATAATAAAAAAAATAATAATAGATCTAGATCTACTGAAGATAAGTTAGTAGAGAATGATCAAAATAAAAAT GAAGATCAACAGCAAAATTTGAAGTTTAAATATACGGAATCTGATGATTTTATAGAAATTGAGTTAGTAGAAAATGAAAA AGAACATCAACAACAGAATTTGAATTTCTATGAGCTTAGTAATTTTAGCAATAAAAAGCCATTAAACAAGGATTATGAGC AAAATAGCGAGTTATCAACTCCAGCTATTACTAAGGATTCAGAGGTTGAAAAGAATGAATGCTGCCCCAAAAGAAAAAGA CTAGCAGATTATTATCCACTAACGCCAGAAGATGCAGTTATACTGCAACGTATGTCTAGTAGAAGCTTCAACATATACTT CATAAATCAATTACTGTTGAAGTTATCAAATAAATATCCAAACCGTCATTTTGAAAATAAGACAGCAGTGCTAAACTATA TGGCAAAAGCGTTAGCAAATGAATTACTAACTACTGATCAGGCTAATAGTGAAAATTTTAGATTTAATGATGTAGGAAGA TTTAAAGAACAGTATCTAGCAAATATTGAATCTGGTACAGATCGTAGTATGAAGGCTCAGTTGAAGCGTAAAATAGCTGG AGTCTTTGAAGCAGATACTGCTTATCAAATTTTAACATCTTGTGATTTTGTAGCAGCGGTTAAAAACAAATATTACATCA AGTTGCTTAAAAATATCACACTAACAGAATGTGATGGATCAAAGATATTACAAGCTGTACAAGATGTATATGGATACGAA ATTCAAGAATTACAAGTTACACCATTTGAGCAACTCAAAACTGTTTCACAGAAACAAATCAATGAAGAAGAGTATCTCTT GAATCTCAGTAAACAACTGGGCTCCAACTCAACTTGGTACAAAGTACGAGAATCTTTGATTAAAAGTTACGGTCAAGCTA TCGATAAATCATGGTTTAGCAAATTAGAAGTTATAAATGAAGATAGTGTTAACAAAAAAATATTCATCAAAGCAAAAACA GAATTTGAAGATAGTTACATCAGAGAGAACTATCTGAAAGATCTTGAGTCCTCTTTTAAAGCTCAAGGATTTTCTTTTGA GTTAGTTAAGTTCGAATAA
Upstream 100 bases:
>100_bases GAATGTTGGTCAAAGAAGAGTTAGGCAATGCTTAGTAGAATTAAGAGATGCAGGTTTTATTGAAGTTGAAAATAGGACAA TAATTAAAGACAACTTTAAG
Downstream 100 bases:
>100_bases TTTTAATAAAATTTAAAGGGTGATATGGAAAAAGATCTTGCAAAGATTGCTCCAAGTAATATTCAGGCAGAGCAAATGAT ACTTGGGGCAATTCTGATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MRNVPCIKLLKNFQRFTEKEKKGEKIIDLTQKIFRSNLKEISGEPEKSFRYIYRYNNNKKNNNRSRSTEDKLVENDQNKN EDQQQNLKFKYTESDDFIEIELVENEKEHQQQNLNFYELSNFSNKKPLNKDYEQNSELSTPAITKDSEVEKNECCPKRKR LADYYPLTPEDAVILQRMSSRSFNIYFINQLLLKLSNKYPNRHFENKTAVLNYMAKALANELLTTDQANSENFRFNDVGR FKEQYLANIESGTDRSMKAQLKRKIAGVFEADTAYQILTSCDFVAAVKNKYYIKLLKNITLTECDGSKILQAVQDVYGYE IQELQVTPFEQLKTVSQKQINEEEYLLNLSKQLGSNSTWYKVRESLIKSYGQAIDKSWFSKLEVINEDSVNKKIFIKAKT EFEDSYIRENYLKDLESSFKAQGFSFELVKFE
Sequences:
>Translated_432_residues MRNVPCIKLLKNFQRFTEKEKKGEKIIDLTQKIFRSNLKEISGEPEKSFRYIYRYNNNKKNNNRSRSTEDKLVENDQNKN EDQQQNLKFKYTESDDFIEIELVENEKEHQQQNLNFYELSNFSNKKPLNKDYEQNSELSTPAITKDSEVEKNECCPKRKR LADYYPLTPEDAVILQRMSSRSFNIYFINQLLLKLSNKYPNRHFENKTAVLNYMAKALANELLTTDQANSENFRFNDVGR FKEQYLANIESGTDRSMKAQLKRKIAGVFEADTAYQILTSCDFVAAVKNKYYIKLLKNITLTECDGSKILQAVQDVYGYE IQELQVTPFEQLKTVSQKQINEEEYLLNLSKQLGSNSTWYKVRESLIKSYGQAIDKSWFSKLEVINEDSVNKKIFIKAKT EFEDSYIRENYLKDLESSFKAQGFSFELVKFE >Mature_432_residues MRNVPCIKLLKNFQRFTEKEKKGEKIIDLTQKIFRSNLKEISGEPEKSFRYIYRYNNNKKNNNRSRSTEDKLVENDQNKN EDQQQNLKFKYTESDDFIEIELVENEKEHQQQNLNFYELSNFSNKKPLNKDYEQNSELSTPAITKDSEVEKNECCPKRKR LADYYPLTPEDAVILQRMSSRSFNIYFINQLLLKLSNKYPNRHFENKTAVLNYMAKALANELLTTDQANSENFRFNDVGR FKEQYLANIESGTDRSMKAQLKRKIAGVFEADTAYQILTSCDFVAAVKNKYYIKLLKNITLTECDGSKILQAVQDVYGYE IQELQVTPFEQLKTVSQKQINEEEYLLNLSKQLGSNSTWYKVRESLIKSYGQAIDKSWFSKLEVINEDSVNKKIFIKAKT EFEDSYIRENYLKDLESSFKAQGFSFELVKFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50884; Mature: 50884
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNVPCIKLLKNFQRFTEKEKKGEKIIDLTQKIFRSNLKEISGEPEKSFRYIYRYNNNKK CCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEECCCCC NNNRSRSTEDKLVENDQNKNEDQQQNLKFKYTESDDFIEIELVENEKEHQQQNLNFYELS CCCCCCCHHHHHHHCCCCCCCHHHHCCEEEEECCCCEEEEEEECCCHHHHHHCCCEEEEC NFSNKKPLNKDYEQNSELSTPAITKDSEVEKNECCPKRKRLADYYPLTPEDAVILQRMSS CCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHCCCHHHHHCCCCCCCCCHHHHHHHHHC RSFNIYFINQLLLKLSNKYPNRHFENKTAVLNYMAKALANELLTTDQANSENFRFNDVGR CCEEEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH FKEQYLANIESGTDRSMKAQLKRKIAGVFEADTAYQILTSCDFVAAVKNKYYIKLLKNIT HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC LTECDGSKILQAVQDVYGYEIQELQVTPFEQLKTVSQKQINEEEYLLNLSKQLGSNSTWY EEECCCHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHH KVRESLIKSYGQAIDKSWFSKLEVINEDSVNKKIFIKAKTEFEDSYIRENYLKDLESSFK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHH AQGFSFELVKFE CCCCEEEEEEEC >Mature Secondary Structure MRNVPCIKLLKNFQRFTEKEKKGEKIIDLTQKIFRSNLKEISGEPEKSFRYIYRYNNNKK CCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEECCCCC NNNRSRSTEDKLVENDQNKNEDQQQNLKFKYTESDDFIEIELVENEKEHQQQNLNFYELS CCCCCCCHHHHHHHCCCCCCCHHHHCCEEEEECCCCEEEEEEECCCHHHHHHCCCEEEEC NFSNKKPLNKDYEQNSELSTPAITKDSEVEKNECCPKRKRLADYYPLTPEDAVILQRMSS CCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHCCCHHHHHCCCCCCCCCHHHHHHHHHC RSFNIYFINQLLLKLSNKYPNRHFENKTAVLNYMAKALANELLTTDQANSENFRFNDVGR CCEEEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH FKEQYLANIESGTDRSMKAQLKRKIAGVFEADTAYQILTSCDFVAAVKNKYYIKLLKNIT HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC LTECDGSKILQAVQDVYGYEIQELQVTPFEQLKTVSQKQINEEEYLLNLSKQLGSNSTWY EEECCCHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHH KVRESLIKSYGQAIDKSWFSKLEVINEDSVNKKIFIKAKTEFEDSYIRENYLKDLESSFK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHH AQGFSFELVKFE CCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA