| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183691
Identifier: 189183691
GI number: 189183691
Start: 825630
End: 825959
Strand: Reverse
Name: 189183691
Synonym: OTT_0784
Alternate gene names: NA
Gene position: 825959-825630 (Counterclockwise)
Preceding gene: 189183696
Following gene: 189183690
Centisome position: 41.11
GC content: 28.79
Gene sequence:
>330_bases TTGTCCTTAGCTGAGTTATTAACAATAGCCATATATTTTTATGTATCTCAATGCAAGGATTGTAAAAATTATTATCTATA TTACTTGAGTTATAAGTATAAAGGATACTTTTGCTTACCAAGCTATAGTAGAATAATACAACTGTGGCCTAGAATGTTGC TACCATTAGTCGTATTAATGCATTATCTGAAAGGAGAAGAGACTGGTATATATTACATCGATTCTACAAAGTTAGCAATT TGTCATAATAAATGTACCTCAAGCAATAGAGTTTTTAACAAAATTTCTAAAATTGGTAAAAGTAAGTTATGGCTCGTTCT TATGCTTTAA
Upstream 100 bases:
>100_bases AACAGTATACTATTTAATAGACAATTTTTGCAAGATATATCAAGAGGGGGAGAGAAAGAGATTAATACCAAGTAGTAATC AAAGGAACAGAGATGGGAAG
Downstream 100 bases:
>100_bases GCTTCATCTTATAATCAATAATAAAGGCGAAATAATGTCAGTTAAAATTACTAAAAGCAATAAAAGCGACCTATCTGTAT CTTCAGTTTTTTCTAAAGGA
Product: transposase
Products: NA
Alternate protein names: Transposase And Inactivated Derivative; Transposase IS4 Family Protein; ISPg3 Transposase
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MSLAELLTIAIYFYVSQCKDCKNYYLYYLSYKYKGYFCLPSYSRIIQLWPRMLLPLVVLMHYLKGEETGIYYIDSTKLAI CHNKCTSSNRVFNKISKIGKSKLWLVLML
Sequences:
>Translated_109_residues MSLAELLTIAIYFYVSQCKDCKNYYLYYLSYKYKGYFCLPSYSRIIQLWPRMLLPLVVLMHYLKGEETGIYYIDSTKLAI CHNKCTSSNRVFNKISKIGKSKLWLVLML >Mature_108_residues SLAELLTIAIYFYVSQCKDCKNYYLYYLSYKYKGYFCLPSYSRIIQLWPRMLLPLVVLMHYLKGEETGIYYIDSTKLAIC HNKCTSSNRVFNKISKIGKSKLWLVLML
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12923; Mature: 12791
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLAELLTIAIYFYVSQCKDCKNYYLYYLSYKYKGYFCLPSYSRIIQLWPRMLLPLVVLM CCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECEEEECCCHHHHHHHHHHHHHHHHHHH HYLKGEETGIYYIDSTKLAICHNKCTSSNRVFNKISKIGKSKLWLVLML HHHCCCCCCEEEECCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEC >Mature Secondary Structure SLAELLTIAIYFYVSQCKDCKNYYLYYLSYKYKGYFCLPSYSRIIQLWPRMLLPLVVLM CHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECEEEECCCHHHHHHHHHHHHHHHHHHH HYLKGEETGIYYIDSTKLAICHNKCTSSNRVFNKISKIGKSKLWLVLML HHHCCCCCCEEEECCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA