| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is yfgL [C]
Identifier: 189183689
GI number: 189183689
Start: 823677
End: 825029
Strand: Direct
Name: yfgL [C]
Synonym: OTT_0782
Alternate gene names: 189183689
Gene position: 823677-825029 (Clockwise)
Preceding gene: 189183688
Following gene: 189183692
Centisome position: 41.0
GC content: 28.75
Gene sequence:
>1353_bases ATGAATAAAAAGTTGGCTTTATTGTCTTTACTATCTTTAATATTGTCAAGTTCTACTGTTCAGAATGTTGAATCGTTATC TAATTCACCAAAGCTGGAAGCAGAAATTGGAGCTAACAAAGTAATGTTACCAATGTTAAAACATGTAAGTAATTGGAATA ATAATATAGAGCCTATAAATGCTAGCAGTAATAATTTTGCTGTTAAAGAATTTGTTGCGTTTAATAAACTGAAGTTAGCT GATCATATATCTGCTCCACCTGTCGTTATACAAGATAAGCTCTTTATACTAAATAATTATGCTCAAGTAAGTTGTTACGA TTTAAATGGTATGAAGAAAGTTTGGACAAAAAAATTAGAACCTCAGCACAGAAACAAAAAAAGATTTGGTGGAGGAAGTA TATTATTTAATGATGGAAAACTTTATATTAGCTATGGTAGTAGAGATATAGTTATACTTAATGCTAGTAATGGAGATGAA GTTTTAAGTAAACGGTTACCTGATATAATTAAAGCACCGCCATTAATACATAATAATTTAATGTTAGTTTTAACAGTAAA TAGACAACTATATTGTATTAATCTAACAAATGCAGAGATTATATGGATGCATCAAGGAGCACAAGAGACACTTATTGGTA ATAGCTTAATTGCTCCAATAATAAGAGGTAATTTGGTTATTGTAAGTTATTCTTCAGATCAAATTGTAGCTTTAAATTTA GAAAATGGAAAACTAGTATGGTCAACAAGTTTAGGTAAAAGCAGAGCAGAAGAGAAAAATTCTTGGAAAACATTTTCATT GTCTAGTTTAGTATCTCAGCCTATTATTAATAATGATATACTATATATAGCAAACGAAGAGGTTATAGAAGCTTACAGAT TTGGTGCTGTTGATGAAGAAAATCAGAATGGGCAAAAAGCTGTTATGCAGTGGAGTAAAAATATTACTGGTATTAGCAAT TTTAATTTAATTGGTAATACATTATTTGTTACAACCATTGATGGAAAATTGTTAGCTATGTCATCTGATAATGGTAAAAT TACCTGGGTAATAAATTTATATGGTAGTAACAAAGATAAATCTAGCACAAAAAATAGTAAGAGTAATAAAAAGCTACTTT CTAGTATTAAAAACAAGCTTGTAAAATTAGGGTCAAGTAATACACAGTATGCTCTTTCACCTATAGCTATAAATAACAAT ATAGTAGTAGTTAGTAAGTACCAATGTTTAGTAATTTCTCCAAGTGATGGTCACATACTATCTCGTATACCTATTAATAG AAATCCTAAATTCTTTGCTGTGTCGGATAAATTATATATTTTTGGCGAAAGTTATGTTAATAGTAGTAGATAG
Upstream 100 bases:
>100_bases AAGCTAAGATGCTAAAACAAAATTATGAAATTAATATGTAGAATTAAAAGCTACAATTAAACAATAAAAATTAAGTAAAA TAAAATATAGGTTTGTGTTT
Downstream 100 bases:
>100_bases AATACGAGCAAATTAGTTTACCAAATGTTATGTATTCTAAGTGGAGATATTTTTTATATTAAATACAGTCTCAATTAAGA GCATTTATTTAATAAACGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 450; Mature: 450
Protein sequence:
>450_residues MNKKLALLSLLSLILSSSTVQNVESLSNSPKLEAEIGANKVMLPMLKHVSNWNNNIEPINASSNNFAVKEFVAFNKLKLA DHISAPPVVIQDKLFILNNYAQVSCYDLNGMKKVWTKKLEPQHRNKKRFGGGSILFNDGKLYISYGSRDIVILNASNGDE VLSKRLPDIIKAPPLIHNNLMLVLTVNRQLYCINLTNAEIIWMHQGAQETLIGNSLIAPIIRGNLVIVSYSSDQIVALNL ENGKLVWSTSLGKSRAEEKNSWKTFSLSSLVSQPIINNDILYIANEEVIEAYRFGAVDEENQNGQKAVMQWSKNITGISN FNLIGNTLFVTTIDGKLLAMSSDNGKITWVINLYGSNKDKSSTKNSKSNKKLLSSIKNKLVKLGSSNTQYALSPIAINNN IVVVSKYQCLVISPSDGHILSRIPINRNPKFFAVSDKLYIFGESYVNSSR
Sequences:
>Translated_450_residues MNKKLALLSLLSLILSSSTVQNVESLSNSPKLEAEIGANKVMLPMLKHVSNWNNNIEPINASSNNFAVKEFVAFNKLKLA DHISAPPVVIQDKLFILNNYAQVSCYDLNGMKKVWTKKLEPQHRNKKRFGGGSILFNDGKLYISYGSRDIVILNASNGDE VLSKRLPDIIKAPPLIHNNLMLVLTVNRQLYCINLTNAEIIWMHQGAQETLIGNSLIAPIIRGNLVIVSYSSDQIVALNL ENGKLVWSTSLGKSRAEEKNSWKTFSLSSLVSQPIINNDILYIANEEVIEAYRFGAVDEENQNGQKAVMQWSKNITGISN FNLIGNTLFVTTIDGKLLAMSSDNGKITWVINLYGSNKDKSSTKNSKSNKKLLSSIKNKLVKLGSSNTQYALSPIAINNN IVVVSKYQCLVISPSDGHILSRIPINRNPKFFAVSDKLYIFGESYVNSSR >Mature_450_residues MNKKLALLSLLSLILSSSTVQNVESLSNSPKLEAEIGANKVMLPMLKHVSNWNNNIEPINASSNNFAVKEFVAFNKLKLA DHISAPPVVIQDKLFILNNYAQVSCYDLNGMKKVWTKKLEPQHRNKKRFGGGSILFNDGKLYISYGSRDIVILNASNGDE VLSKRLPDIIKAPPLIHNNLMLVLTVNRQLYCINLTNAEIIWMHQGAQETLIGNSLIAPIIRGNLVIVSYSSDQIVALNL ENGKLVWSTSLGKSRAEEKNSWKTFSLSSLVSQPIINNDILYIANEEVIEAYRFGAVDEENQNGQKAVMQWSKNITGISN FNLIGNTLFVTTIDGKLLAMSSDNGKITWVINLYGSNKDKSSTKNSKSNKKLLSSIKNKLVKLGSSNTQYALSPIAINNN IVVVSKYQCLVISPSDGHILSRIPINRNPKFFAVSDKLYIFGESYVNSSR
Specific function: Unknown
COG id: COG1520
COG function: function code S; FOG: WD40-like repeat
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018391 - InterPro: IPR002372 - InterPro: IPR011047 [H]
Pfam domain/function: PF01011 PQQ [H]
EC number: NA
Molecular weight: Translated: 49919; Mature: 49919
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKLALLSLLSLILSSSTVQNVESLSNSPKLEAEIGANKVMLPMLKHVSNWNNNIEPIN CCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEECCCCEEHHHHHHHHHCCCCCCCEEC ASSNNFAVKEFVAFNKLKLADHISAPPVVIQDKLFILNNYAQVSCYDLNGMKKVWTKKLE CCCCCEEHHHHHHHCCEEEHHCCCCCCEEEECEEEEEECCEEEEEEECCCHHHHHHHCCC PQHRNKKRFGGGSILFNDGKLYISYGSRDIVILNASNGDEVLSKRLPDIIKAPPLIHNNL CCCCCCCCCCCCEEEEECCEEEEEECCCEEEEEECCCCHHHHHHHCCHHHCCCCEECCCE MLVLTVNRQLYCINLTNAEIIWMHQGAQETLIGNSLIAPIIRGNLVIVSYSSDQIVALNL EEEEEECCEEEEEEECCCEEEEEECCCCHHHCCCHHHHHHHCCCEEEEEECCCCEEEEEE ENGKLVWSTSLGKSRAEEKNSWKTFSLSSLVSQPIINNDILYIANEEVIEAYRFGAVDEE CCCEEEEEECCCCCHHHHCCCCEEEEHHHHHCCCCCCCCEEEEECHHHHHHHHCCCCCCC NQNGQKAVMQWSKNITGISNFNLIGNTLFVTTIDGKLLAMSSDNGKITWVINLYGSNKDK CCCCHHHHHHHHCCCCCCCCCEEECCEEEEEEECCEEEEEECCCCEEEEEEEEECCCCCC SSTKNSKSNKKLLSSIKNKLVKLGSSNTQYALSPIAINNNIVVVSKYQCLVISPSDGHIL CCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCEEEEEEEEEEEEECCCCCEE SRIPINRNPKFFAVSDKLYIFGESYVNSSR EECCCCCCCCEEEEECEEEEEEHHHCCCCC >Mature Secondary Structure MNKKLALLSLLSLILSSSTVQNVESLSNSPKLEAEIGANKVMLPMLKHVSNWNNNIEPIN CCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEECCCCEEHHHHHHHHHCCCCCCCEEC ASSNNFAVKEFVAFNKLKLADHISAPPVVIQDKLFILNNYAQVSCYDLNGMKKVWTKKLE CCCCCEEHHHHHHHCCEEEHHCCCCCCEEEECEEEEEECCEEEEEEECCCHHHHHHHCCC PQHRNKKRFGGGSILFNDGKLYISYGSRDIVILNASNGDEVLSKRLPDIIKAPPLIHNNL CCCCCCCCCCCCEEEEECCEEEEEECCCEEEEEECCCCHHHHHHHCCHHHCCCCEECCCE MLVLTVNRQLYCINLTNAEIIWMHQGAQETLIGNSLIAPIIRGNLVIVSYSSDQIVALNL EEEEEECCEEEEEEECCCEEEEEECCCCHHHCCCHHHHHHHCCCEEEEEECCCCEEEEEE ENGKLVWSTSLGKSRAEEKNSWKTFSLSSLVSQPIINNDILYIANEEVIEAYRFGAVDEE CCCEEEEEECCCCCHHHHCCCCEEEEHHHHHCCCCCCCCEEEEECHHHHHHHHCCCCCCC NQNGQKAVMQWSKNITGISNFNLIGNTLFVTTIDGKLLAMSSDNGKITWVINLYGSNKDK CCCCHHHHHHHHCCCCCCCCCEEECCEEEEEEECCEEEEEECCCCEEEEEEEEECCCCCC SSTKNSKSNKKLLSSIKNKLVKLGSSNTQYALSPIAINNNIVVVSKYQCLVISPSDGHIL CCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCEEEEEEEEEEEEECCCCCEE SRIPINRNPKFFAVSDKLYIFGESYVNSSR EECCCCCCCCEEEEECEEEEEEHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]