| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183643
Identifier: 189183643
GI number: 189183643
Start: 761672
End: 763201
Strand: Reverse
Name: 189183643
Synonym: OTT_0736
Alternate gene names: NA
Gene position: 763201-761672 (Counterclockwise)
Preceding gene: 189183644
Following gene: 189183641
Centisome position: 37.99
GC content: 27.52
Gene sequence:
>1530_bases TTGTCTTATTTTGAGGCAAAAGAAGATTGGTATGACATTGCAGTATTACATATAAACAGGACCTTTGAAAATGAAGTATT TCATTGCGAAAAAGCTATTGATGCTGTTTTTAAAATTAACAAAACCTCTGAAAGAGATAAGTATGCTTTTGTATCAACAG TATTGAAATATAATATACTAAATGATGAAGAAAATTGGGCTGGATATTTAAAATTTTCAGATAAACTACAAAAATTTTCT ACAGGTGTATATAATACACTGAATACAGCTATTTTATATAAAAAAATTTCAACTTTTATATTGAAAAGTGATAAAAGCAA TTCTGAAAAATATATAGAAAAGTTACCAGAATCACTTCCCAAAGAAATTATAAACTTAGAATACAGATTGAAATTTGATA GTAATTTTGATTATAGTAGTGAAGTACAACATATATATAATATAAAGGCTAAAATTGACCAGCAAAAATTAATGATTGCA GGTAGAATTTTATCAGAACCAGTTCTAAGGGTTCTGATAAAATTTTGGCAACATTTTGATATCTGTAATAATGATCAGCA ATGTAATAATATTCTACAAATTTGCGCTGATTTAGCAAAATATCACTCATTATCCAGTACGCAAGATGATATAACAAATC TTCTTAATAACTCTTCTATAAAAAACAAACCTTCATCAGATGTAATAGTTGCAAATAATCTTAAAAAATATGACACAGCT GATAAACGTAAGAATAATCAAGGTATATCACTGAAAAAAGCATCATTAAATGACTATGCTACTACATCTTCTCATAAGAA GAATCAAGTAACTACCAAAAATGAGTTGGAGCAAAATGTAGAGATAAAATCAGGAGATGCAGTAGATTTTTTAGATAATG TGAACACAGATGAAGTAAGTGAAGTAGATGAAAATATAGATAATTCATGTGTAAATAATACTGTATTTGATGAACAGTAT ACACCAGGTGAGTTTTATACAAAATTAATGCAAGTATATAAAAAGCACAATGATTTGTTTACAAGGCATGATAAGCATCA GCACATTCATTGCCATACTAAAAAACATACTTATTGTACCTTTGATCCAGATGTAAAGAAGTGTACATGGAATGGAAAGA CATATTATTGCGCTATCTCTAAAGATCTCAAATTAGATTCTGTAAAACAGATGTATTATCGGAATGCTTTAGAAAAAGAA TTTGTTTCATCGAATATCAACCAATCTGGTATAAAATGCTTGCCTAATAAGATGTTTGAATTAAAGGTTTGCAAAGAAGA TTTTAGATTATTAGCTTGTAATACATACGTAGACAATAAAGGAAATTATTTTATTATTTTTAATAAAGAAACTAATCATA CAGGAATATCGAACATTATTAGTAACTCAACTCTTAGCAACGATCCAATTTTGACAGAATCGTGTAAAGACTGTAATGAC GAAGCTGATAGTACTACAGTAAATACTGATATTACACCATGTGTAATAGGACAAATGCTTAATCAAACTGAATATTATAA TGATTGTTAA
Upstream 100 bases:
>100_bases TGAAGATGATAAAAAAAATTATGTTATAACTTTCCTTGAAGATGTTCTAAATTATTTTATATTACCTGCTCACAAAACAG AAAGCCTTACTAAAGTTATA
Downstream 100 bases:
>100_bases TCATGCAACAAAAAAGTACACAAAATTAAATTTATTGTAACAAGTTTTCCAAGAGTTGGGAGATTTATATTAACTATAGT TCGATATAAGAGCTACATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 509; Mature: 508
Protein sequence:
>509_residues MSYFEAKEDWYDIAVLHINRTFENEVFHCEKAIDAVFKINKTSERDKYAFVSTVLKYNILNDEENWAGYLKFSDKLQKFS TGVYNTLNTAILYKKISTFILKSDKSNSEKYIEKLPESLPKEIINLEYRLKFDSNFDYSSEVQHIYNIKAKIDQQKLMIA GRILSEPVLRVLIKFWQHFDICNNDQQCNNILQICADLAKYHSLSSTQDDITNLLNNSSIKNKPSSDVIVANNLKKYDTA DKRKNNQGISLKKASLNDYATTSSHKKNQVTTKNELEQNVEIKSGDAVDFLDNVNTDEVSEVDENIDNSCVNNTVFDEQY TPGEFYTKLMQVYKKHNDLFTRHDKHQHIHCHTKKHTYCTFDPDVKKCTWNGKTYYCAISKDLKLDSVKQMYYRNALEKE FVSSNINQSGIKCLPNKMFELKVCKEDFRLLACNTYVDNKGNYFIIFNKETNHTGISNIISNSTLSNDPILTESCKDCND EADSTTVNTDITPCVIGQMLNQTEYYNDC
Sequences:
>Translated_509_residues MSYFEAKEDWYDIAVLHINRTFENEVFHCEKAIDAVFKINKTSERDKYAFVSTVLKYNILNDEENWAGYLKFSDKLQKFS TGVYNTLNTAILYKKISTFILKSDKSNSEKYIEKLPESLPKEIINLEYRLKFDSNFDYSSEVQHIYNIKAKIDQQKLMIA GRILSEPVLRVLIKFWQHFDICNNDQQCNNILQICADLAKYHSLSSTQDDITNLLNNSSIKNKPSSDVIVANNLKKYDTA DKRKNNQGISLKKASLNDYATTSSHKKNQVTTKNELEQNVEIKSGDAVDFLDNVNTDEVSEVDENIDNSCVNNTVFDEQY TPGEFYTKLMQVYKKHNDLFTRHDKHQHIHCHTKKHTYCTFDPDVKKCTWNGKTYYCAISKDLKLDSVKQMYYRNALEKE FVSSNINQSGIKCLPNKMFELKVCKEDFRLLACNTYVDNKGNYFIIFNKETNHTGISNIISNSTLSNDPILTESCKDCND EADSTTVNTDITPCVIGQMLNQTEYYNDC >Mature_508_residues SYFEAKEDWYDIAVLHINRTFENEVFHCEKAIDAVFKINKTSERDKYAFVSTVLKYNILNDEENWAGYLKFSDKLQKFST GVYNTLNTAILYKKISTFILKSDKSNSEKYIEKLPESLPKEIINLEYRLKFDSNFDYSSEVQHIYNIKAKIDQQKLMIAG RILSEPVLRVLIKFWQHFDICNNDQQCNNILQICADLAKYHSLSSTQDDITNLLNNSSIKNKPSSDVIVANNLKKYDTAD KRKNNQGISLKKASLNDYATTSSHKKNQVTTKNELEQNVEIKSGDAVDFLDNVNTDEVSEVDENIDNSCVNNTVFDEQYT PGEFYTKLMQVYKKHNDLFTRHDKHQHIHCHTKKHTYCTFDPDVKKCTWNGKTYYCAISKDLKLDSVKQMYYRNALEKEF VSSNINQSGIKCLPNKMFELKVCKEDFRLLACNTYVDNKGNYFIIFNKETNHTGISNIISNSTLSNDPILTESCKDCNDE ADSTTVNTDITPCVIGQMLNQTEYYNDC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58936; Mature: 58804
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYFEAKEDWYDIAVLHINRTFENEVFHCEKAIDAVFKINKTSERDKYAFVSTVLKYNIL CCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC NDEENWAGYLKFSDKLQKFSTGVYNTLNTAILYKKISTFILKSDKSNSEKYIEKLPESLP CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHH KEIINLEYRLKFDSNFDYSSEVQHIYNIKAKIDQQKLMIAGRILSEPVLRVLIKFWQHFD HHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCC ICNNDQQCNNILQICADLAKYHSLSSTQDDITNLLNNSSIKNKPSSDVIVANNLKKYDTA CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCEEEECCCHHHCCH DKRKNNQGISLKKASLNDYATTSSHKKNQVTTKNELEQNVEIKSGDAVDFLDNVNTDEVS HHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCEECCCCCHHHHHCCCCHHHH EVDENIDNSCVNNTVFDEQYTPGEFYTKLMQVYKKHNDLFTRHDKHQHIHCHTKKHTYCT HHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEE FDPDVKKCTWNGKTYYCAISKDLKLDSVKQMYYRNALEKEFVSSNINQSGIKCLPNKMFE ECCCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHEE LKVCKEDFRLLACNTYVDNKGNYFIIFNKETNHTGISNIISNSTLSNDPILTESCKDCND EEEECCCCEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCHHHCCCC EADSTTVNTDITPCVIGQMLNQTEYYNDC CCCCCEECCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SYFEAKEDWYDIAVLHINRTFENEVFHCEKAIDAVFKINKTSERDKYAFVSTVLKYNIL CCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC NDEENWAGYLKFSDKLQKFSTGVYNTLNTAILYKKISTFILKSDKSNSEKYIEKLPESLP CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHH KEIINLEYRLKFDSNFDYSSEVQHIYNIKAKIDQQKLMIAGRILSEPVLRVLIKFWQHFD HHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCC ICNNDQQCNNILQICADLAKYHSLSSTQDDITNLLNNSSIKNKPSSDVIVANNLKKYDTA CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCEEEECCCHHHCCH DKRKNNQGISLKKASLNDYATTSSHKKNQVTTKNELEQNVEIKSGDAVDFLDNVNTDEVS HHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCEECCCCCHHHHHCCCCHHHH EVDENIDNSCVNNTVFDEQYTPGEFYTKLMQVYKKHNDLFTRHDKHQHIHCHTKKHTYCT HHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEE FDPDVKKCTWNGKTYYCAISKDLKLDSVKQMYYRNALEKEFVSSNINQSGIKCLPNKMFE ECCCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHEE LKVCKEDFRLLACNTYVDNKGNYFIIFNKETNHTGISNIISNSTLSNDPILTESCKDCND EEEECCCCEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCHHHCCCC EADSTTVNTDITPCVIGQMLNQTEYYNDC CCCCCEECCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA