| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183637
Identifier: 189183637
GI number: 189183637
Start: 754497
End: 754922
Strand: Reverse
Name: 189183637
Synonym: OTT_0730
Alternate gene names: NA
Gene position: 754922-754497 (Counterclockwise)
Preceding gene: 189183640
Following gene: 189183636
Centisome position: 37.58
GC content: 28.87
Gene sequence:
>426_bases TTGTCCTTAGCTGAGTTATTAACAATAGCGATATATTTTTATGTATCTCAATGCAAGGATTGTAAAAATTATTATCTATA TTACTTGAGTTATAAGTATAAAGGATACTTTTGCTTACCAAGCTATAGTAGAATAATACAACTGTGGCCTAGAATGTTGC TACCATTAGTCGTATTAATGTATTATCTGAAAGGAGAAGAGGCTGGTATATATTACATCGATGCTACAAAGTTAACAATT TGTCATAATAAACGTACCTCTAGCAATAGAGTTTTTAACAAAATTTCTAAAATTGGTAAAAGTAGTTATGGCTGGTTCTT AGTCTTTAAGCTTCATCTTATAATCAATAACAAAGGCGAAATAATATCAGTTAAAATTACTAAAGGCAATAAAAGTTACC TATCTGTAGCTTCAGTTTTTTTCTGA
Upstream 100 bases:
>100_bases AACAGTATACTATTTAATAGACAATTTTTGCAAGATATATCAATAGTGGGAGAGAAAGAGATTAATACCAAGTAGTAATC AAAGGAACAGAGATGGGAAG
Downstream 100 bases:
>100_bases AGGCTTATCTGGTAAATTGTTTGGTGATAAAGCTTACATATCTAAAGAGTTATTTCATCAACTGCTGACTAATGGTCTAC GTTTATTTACTAATCTTCGT
Product: transposase
Products: NA
Alternate protein names: Transposase IS4 Family Protein; ISPg3 Transposase; Transposase And Inactivated Derivative; Membrane-Associated Metal-Dependent Hydrolase; Transposase IS4 Family; Transposase IS; IS4 Family Transposase
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MSLAELLTIAIYFYVSQCKDCKNYYLYYLSYKYKGYFCLPSYSRIIQLWPRMLLPLVVLMYYLKGEEAGIYYIDATKLTI CHNKRTSSNRVFNKISKIGKSSYGWFLVFKLHLIINNKGEIISVKITKGNKSYLSVASVFF
Sequences:
>Translated_141_residues MSLAELLTIAIYFYVSQCKDCKNYYLYYLSYKYKGYFCLPSYSRIIQLWPRMLLPLVVLMYYLKGEEAGIYYIDATKLTI CHNKRTSSNRVFNKISKIGKSSYGWFLVFKLHLIINNKGEIISVKITKGNKSYLSVASVFF >Mature_140_residues SLAELLTIAIYFYVSQCKDCKNYYLYYLSYKYKGYFCLPSYSRIIQLWPRMLLPLVVLMYYLKGEEAGIYYIDATKLTIC HNKRTSSNRVFNKISKIGKSSYGWFLVFKLHLIINNKGEIISVKITKGNKSYLSVASVFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16533; Mature: 16402
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLAELLTIAIYFYVSQCKDCKNYYLYYLSYKYKGYFCLPSYSRIIQLWPRMLLPLVVLM CCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECEEEECCCHHHHHHHHHHHHHHHHHHH YYLKGEEAGIYYIDATKLTICHNKRTSSNRVFNKISKIGKSSYGWFLVFKLHLIINNKGE HHHCCCCCCEEEEECEEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCC IISVKITKGNKSYLSVASVFF EEEEEEECCCCHHHHHHHHCC >Mature Secondary Structure SLAELLTIAIYFYVSQCKDCKNYYLYYLSYKYKGYFCLPSYSRIIQLWPRMLLPLVVLM CHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECEEEECCCHHHHHHHHHHHHHHHHHHH YYLKGEEAGIYYIDATKLTICHNKRTSSNRVFNKISKIGKSSYGWFLVFKLHLIINNKGE HHHCCCCCCEEEEECEEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCC IISVKITKGNKSYLSVASVFF EEEEEEECCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA