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The map label for this gene is petA [H]

Identifier: 189183630

GI number: 189183630

Start: 748599

End: 749264

Strand: Reverse

Name: petA [H]

Synonym: OTT_0723

Alternate gene names: 189183630

Gene position: 749264-748599 (Counterclockwise)

Preceding gene: 189183631

Following gene: 189183629

Centisome position: 37.3

GC content: 33.78

Gene sequence:

>666_bases
ATGAGTAATATTGATAAAAATATTGAAGCTGCAAAATCTATTGCAGAGGCCAATATTGATAAACGTAGTACAAGGCAAAC
ACAAAAGCTAAATAATGTATCTCTAAATCAAACTTTGAGTTCAGATCTAAATTTATCAACAAGTAATGATGACTCAAATA
CAAAAGTAACTAGAAGAGATTTTATGGTACTTACAGCCACCAGCATGGCTAGTATTGGAGCAGTTAGCAGTTTATGGCCG
TTTATTGATTCATTAAATCCAGCAGCAAATGTTTCAGCTTTATCATCTGTTGAAGTGGATATTGATAAAATTCAGTGCGG
ACAAGCTATAACAATAAGCTGGCAAGGTAAGCCGGTATTTATTAAGCATAGAACTGATGAGGAAATAAAGGAAGCAAGAG
CAGTTAATTTATCTGAGTTAATTGATCCAGAAGAAGATAATACTAGAGTAAAGTCTGGATACGATCAATGGTTAGTTGTA
ATAGGAATATGTACGCATCTTGGATGTATTCCTACAGATCGTAGTGGAGAGTATAATGGATGGTTTTGCCCATGCCATGG
GTCACATTATGATACTTCTGGCCGAATAAGAAAAGGACCGGCTCCTAAAAATTTAGAAATTCCTCCTTATCAATTTATTA
CTGATAAAAAAATTAAAATTGGTTAA

Upstream 100 bases:

>100_bases
ATTAGATAATAATTTTGCTAAACTGATAAGTTATTGATTTTTTCTAGCAATGGAGTAATATCATAGCAATAGGTTGTTAT
TAACGTTACTAACTATTAAG

Downstream 100 bases:

>100_bases
CTTTTGTTAGCTATTGTTTTTTAAGTTTACACTCATAAAAGTCAACTTTTTTAAGAAAATGTGATGATATACAAAAGTTA
CTTAGTAATTATAAGTTAAA

Product: cytochrome b6-f complex iron-sulfur subunit

Products: NA

Alternate protein names: Rieske iron-sulfur protein; RISP [H]

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MSNIDKNIEAAKSIAEANIDKRSTRQTQKLNNVSLNQTLSSDLNLSTSNDDSNTKVTRRDFMVLTATSMASIGAVSSLWP
FIDSLNPAANVSALSSVEVDIDKIQCGQAITISWQGKPVFIKHRTDEEIKEARAVNLSELIDPEEDNTRVKSGYDQWLVV
IGICTHLGCIPTDRSGEYNGWFCPCHGSHYDTSGRIRKGPAPKNLEIPPYQFITDKKIKIG

Sequences:

>Translated_221_residues
MSNIDKNIEAAKSIAEANIDKRSTRQTQKLNNVSLNQTLSSDLNLSTSNDDSNTKVTRRDFMVLTATSMASIGAVSSLWP
FIDSLNPAANVSALSSVEVDIDKIQCGQAITISWQGKPVFIKHRTDEEIKEARAVNLSELIDPEEDNTRVKSGYDQWLVV
IGICTHLGCIPTDRSGEYNGWFCPCHGSHYDTSGRIRKGPAPKNLEIPPYQFITDKKIKIG
>Mature_220_residues
SNIDKNIEAAKSIAEANIDKRSTRQTQKLNNVSLNQTLSSDLNLSTSNDDSNTKVTRRDFMVLTATSMASIGAVSSLWPF
IDSLNPAANVSALSSVEVDIDKIQCGQAITISWQGKPVFIKHRTDEEIKEARAVNLSELIDPEEDNTRVKSGYDQWLVVI
GICTHLGCIPTDRSGEYNGWFCPCHGSHYDTSGRIRKGPAPKNLEIPPYQFITDKKIKIG

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Homo sapiens, GI163644321, Length=181, Percent_Identity=41.4364640883978, Blast_Score=173, Evalue=1e-43,
Organism=Caenorhabditis elegans, GI17540418, Length=206, Percent_Identity=43.2038834951456, Blast_Score=167, Evalue=3e-42,
Organism=Saccharomyces cerevisiae, GI6320811, Length=212, Percent_Identity=44.3396226415094, Blast_Score=197, Evalue=1e-51,
Organism=Drosophila melanogaster, GI24580896, Length=141, Percent_Identity=50.354609929078, Blast_Score=167, Evalue=6e-42,
Organism=Drosophila melanogaster, GI17864350, Length=92, Percent_Identity=36.9565217391304, Blast_Score=67, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805
- InterPro:   IPR006311
- InterPro:   IPR019470
- InterPro:   IPR006317 [H]

Pfam domain/function: PF00355 Rieske; PF10399 UCR_Fe-S_N [H]

EC number: =1.10.2.2 [H]

Molecular weight: Translated: 24413; Mature: 24281

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNIDKNIEAAKSIAEANIDKRSTRQTQKLNNVSLNQTLSSDLNLSTSNDDSNTKVTRRD
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHCCCCCEECCCCCCCCEEEEEE
FMVLTATSMASIGAVSSLWPFIDSLNPAANVSALSSVEVDIDKIQCGQAITISWQGKPVF
EEEEEECHHHHHHHHHHHHHHHHCCCCCCCCHHHHEEEEEHHEECCCCEEEEEECCCEEE
IKHRTDEEIKEARAVNLSELIDPEEDNTRVKSGYDQWLVVIGICTHLGCIPTDRSGEYNG
EEECCCHHHHHHHCCCHHHHCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
WFCPCHGSHYDTSGRIRKGPAPKNLEIPPYQFITDKKIKIG
EEEECCCCCCCCCCCEECCCCCCCCCCCCEEEECCCEEECC
>Mature Secondary Structure 
SNIDKNIEAAKSIAEANIDKRSTRQTQKLNNVSLNQTLSSDLNLSTSNDDSNTKVTRRD
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHCCCCCEECCCCCCCCEEEEEE
FMVLTATSMASIGAVSSLWPFIDSLNPAANVSALSSVEVDIDKIQCGQAITISWQGKPVF
EEEEEECHHHHHHHHHHHHHHHHCCCCCCCCHHHHEEEEEHHEECCCCEEEEEECCCEEE
IKHRTDEEIKEARAVNLSELIDPEEDNTRVKSGYDQWLVVIGICTHLGCIPTDRSGEYNG
EEECCCHHHHHHHCCCHHHHCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
WFCPCHGSHYDTSGRIRKGPAPKNLEIPPYQFITDKKIKIG
EEEECCCCCCCCCCCEECCCCCCCCCCCCEEEECCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]